Evidence map›Paper›PMID 36560745›Full record

ArticleViruses2022

New Insights into Lymphocystis Disease Virus Genome Diversity.

Jessica Benkaroun, Sven M Bergmann, Angela Römer-Oberdörfer, Menekse Didem Demircan, Cüneyt Tamer, Gayatri Rajendra Kachh, Manfred Weidmann

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 5 countries.

Jessica BenkarounInstitute of Aquaculture, University of Stirling, Stirling FK9 4LA, Scotland, UK.ORCID 0000-0002-5514-6256
Sven M BergmannInstitute of Infectology, Friedrich-Loffler-Institute (FLI), Federal Research Institute for Animal Health, 17493 Greifswald, Germany.
Angela Römer-OberdörferInstitute of Infectology, Friedrich-Loffler-Institute (FLI), Federal Research Institute for Animal Health, 17493 Greifswald, Germany.
Menekse Didem DemircanFaculty of Aquatic Sciences, Istanbul University, 34130 Laleli/İstanbul, Turkey.ORCID 0000-0002-3571-4682
Cüneyt TamerDepartment of Virology, Faculty of Veterinary Medicine, Ondokuz Mayis University, 55200 Samsun, Turkey.ORCID 0000-0003-3240-8425
Gayatri Rajendra KachhInstitute of Aquaculture, University of Stirling, Stirling FK9 4LA, Scotland, UK.ORCID 0000-0002-6156-3857
Manfred WeidmannInstitute of Aquaculture, University of Stirling, Stirling FK9 4LA, Scotland, UK.ORCID 0000-0002-7063-7491
University of Stirling · GBFriedrich-Loeffler-Institut · DEIstanbul University · TROndokuz Mayıs University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lymphocystis disease viruses (LCDVs) are viruses that infect bony fish which has been found in different locations across the globe. Four virus species have been classified by the International Committee on Taxonomy of Viruses (ICTV), despite remarkable discrepancies in genome size. Whole genome sequencing and phylogenetic analysis of LCDVs from wild fish from the North Sea and partial sequences from gilthead sea bream of an aquafarm located in the Aegean Sea in Turkey confirm that the LCDV1 genome at 100 kb is approximately half the size of the genomes of LCDV2-4. Since the fish species, of which LCDV1 was isolated, differ taxonomically at the order level, co-speciation can be excluded as the driver of the adaptation of the genome of this nucleocytoplasmic large DNA virus, but may represent an adaptation to the lifestyle of this demersal fish in the northeast Atlantic.

Indexed as

IridoviridaeSea BreamAnimalsDNA VirusesGenome, ViralPhylogenydemersal fishLCDV1lymphocystis disease virusnucleocytoplasmic large DNA viruswhole genome

Identifiers

PMID36560745
PMCPMC9781669
OpenAlexW4311955376

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.