Evidence map›Paper›PMID 36560738›Full record

ArticleViruses2022

Molecular Epidemiology of the Norwegian SARS-CoV-2 Delta Lineage AY.63.

Line Victoria Moen, Hilde Synnøve Vollan, Jon Bråte, Olav Hungnes, Karoline Bragstad

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Line Victoria MoenDivision of Infectious Disease Control and Environmental Health, Norwegian Institute of Public Health, 0213 Oslo, Norway.
Hilde Synnøve VollanDivision of Infectious Disease Control and Environmental Health, Norwegian Institute of Public Health, 0213 Oslo, Norway.
Jon BråteDivision of Infectious Disease Control and Environmental Health, Norwegian Institute of Public Health, 0213 Oslo, Norway.
Olav HungnesDivision of Infectious Disease Control and Environmental Health, Norwegian Institute of Public Health, 0213 Oslo, Norway.
Karoline BragstadDivision of Infectious Disease Control and Environmental Health, Norwegian Institute of Public Health, 0213 Oslo, Norway.
Norwegian Institute of Public Health · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Extensive genomic surveillance has given great insights into the evolution of the SARS-CoV-2 virus and emerging variants. During the summer months of 2021, Norway was dominated by the Pango lineage AY.63 which is a sub-lineage of the highly transmissible Delta variant. Strikingly, AY.63 did not spread in other countries to any significant extent. AY.63 carried a key mutation, A222V, in the spike protein, as well as the deletion of three residues in nsp1. Although these mutations are close to functionally important areas, we did not find any evidence that they induced higher fitness compared to other Delta lineages. This variant was introduced to Norway at a time when there were low levels of SARS-CoV-2 and contact-reducing measures were relaxed, which probably explains why the lineage rose so quickly. Furthermore, we found that the lack of imports of AY.63 from other countries probably led to the eventual demise of the lineage in Norway.

Indexed as

COVID-19HumansMolecular EpidemiologyNorwaySARS-CoV-2AY.63DeltaNorwaySARS-CoV-2

Identifiers

PMID36560738
PMCPMC9781678
OpenAlexW4311853440

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.