Evidence map›Paper›PMID 36560715›Full record

ArticleViruses2022

Multifunctional Protein A Is the Only Viral Protein Required for Nodavirus RNA Replication Crown Formation.

Johan A den Boon, Hong Zhan, Nuruddin Unchwaniwala, Mark Horswill, Kailey Slavik, Janice Pennington, Amanda Navine, Paul Ahlquist

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Nodavirus RNA replication crown architecture reveals proto-crown precursor and viral protein A conformational switching.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Johan A den BoonJohn W. and Jeanne M. Rowe Center for Research in Virology, Morgridge Institute for Research, Madison, WI 53715, USA.ORCID 0000-0002-5507-917X
Hong ZhanJohn W. and Jeanne M. Rowe Center for Research in Virology, Morgridge Institute for Research, Madison, WI 53715, USA.ORCID 0000-0002-7625-3528
Nuruddin UnchwaniwalaJohn W. and Jeanne M. Rowe Center for Research in Virology, Morgridge Institute for Research, Madison, WI 53715, USA.ORCID 0000-0001-8446-9313
Mark HorswillJohn W. and Jeanne M. Rowe Center for Research in Virology, Morgridge Institute for Research, Madison, WI 53715, USA.
Kailey SlavikJohn W. and Jeanne M. Rowe Center for Research in Virology, Morgridge Institute for Research, Madison, WI 53715, USA.
Janice PenningtonJohn W. and Jeanne M. Rowe Center for Research in Virology, Morgridge Institute for Research, Madison, WI 53715, USA.
Amanda NavineJohn W. and Jeanne M. Rowe Center for Research in Virology, Morgridge Institute for Research, Madison, WI 53715, USA.ORCID 0000-0003-4827-461X
Paul AhlquistJohn W. and Jeanne M. Rowe Center for Research in Virology, Morgridge Institute for Research, Madison, WI 53715, USA.
University of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Positive-strand RNA virus RNA genome replication occurs in membrane-associated RNA replication complexes (RCs). Nodavirus RCs are outer mitochondrial membrane invaginations whose necked openings to the cytosol are "crowned" by a 12-fold symmetrical proteinaceous ring that functions as the main engine of RNA replication. Similar protein crowns recently visualized at the openings of alphavirus and coronavirus RCs highlight their broad conservation and functional importance. Using cryo-EM tomography, we earlier showed that the major nodavirus crown constituent is viral protein A, whose polymerase, RNA capping, membrane interaction and multimerization domains drive RC formation and function. Other viral proteins are strong candidates for unassigned EM density in the crown. RNA-binding RNAi inhibitor protein B2 co-immunoprecipitates with protein A and could form crown subdomains that protect nascent viral RNA and dsRNA templates. Capsid protein may interact with the crown since nodavirus virion assembly has spatial and other links to RNA replication. Using cryoelectron tomography and complementary approaches, we show that, even when formed in mammalian cells, nodavirus RC crowns generated without B2 and capsid proteins are functional and structurally indistinguishable from mature crowns in infected

Indexed as

RNA ReplicationViral ProteinsAnimalsCapsid ProteinsDrosophilaMammalsRNA, Double-StrandedRNA, ViralVirus AssemblyVirus ReplicationCapsid ProteinsRNA, Double-StrandedRNA, ViralViral Proteinscrown complexcryo-EM tomographynodaviruspositive-strand RNA virusRNA replication complex

Identifiers

PMID36560715
PMCPMC9788154
OpenAlexW4312062430

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.