Evidence map›Paper›PMID 36560605›Full record

ArticleViruses2022

Emergence of High Pathogenicity Avian Influenza Virus H5N1 Clade 2.3.4.4b in Wild Birds and Poultry in Botswana.

Samantha L Letsholo, Joe James, Stephanie M Meyer, Alexander M P Byrne, Scott M Reid, Tirumala B K Settypalli, Sneha Datta, Letlhogile Oarabile, Obakeng Kemolatlhe, Kgakgamatso T Pebe and 12 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 4 institutions in 3 countries.

Samantha L LetsholoBotswana National Veterinary Laboratory (BNVL), Private Bag 0035, Gaborone, Botswana.
Joe JamesAnimal and Plant Health Agency (APHA)-Woodham Ln, Addlestone KT15 3NB, UK.ORCID 0000-0002-9673-3684
Stephanie M MeyerAnimal and Plant Health Agency (APHA)-Woodham Ln, Addlestone KT15 3NB, UK.
Alexander M P ByrneAnimal and Plant Health Agency (APHA)-Woodham Ln, Addlestone KT15 3NB, UK.ORCID 0000-0002-7448-8200
Scott M ReidAnimal and Plant Health Agency (APHA)-Woodham Ln, Addlestone KT15 3NB, UK.
Tirumala B K SettypalliAnimal Production and Health Laboratory (APHL), United Nations Food and Agriculture Organisation (FAO)/International Atomic Energy Agency (IAEA) Agriculture and Biotechnology Laboratory, IAEA Laboratories, Friedenstrasse 1, 2444 Seibersdorf, Austria.ORCID 0000-0002-9090-8471
Sneha DattaAnimal Production and Health Laboratory (APHL), United Nations Food and Agriculture Organisation (FAO)/International Atomic Energy Agency (IAEA) Agriculture and Biotechnology Laboratory, IAEA Laboratories, Friedenstrasse 1, 2444 Seibersdorf, Austria.
Letlhogile OarabileDepartment of Veterinary Services (DVS), Ministry of Agriculture, Private Bag 0032, Gaborone, Botswana.
Obakeng KemolatlheDepartment of Veterinary Services (DVS), Ministry of Agriculture, Private Bag 0032, Gaborone, Botswana.
Kgakgamatso T PebeDepartment of Veterinary Services (DVS), Ministry of Agriculture, Private Bag 0032, Gaborone, Botswana.
Bruce R MafonkoDepartment of Veterinary Services (DVS), Ministry of Agriculture, Private Bag 0032, Gaborone, Botswana.
Tebogo J KgotleleBotswana National Veterinary Laboratory (BNVL), Private Bag 0035, Gaborone, Botswana.
Kago KumileBotswana National Veterinary Laboratory (BNVL), Private Bag 0035, Gaborone, Botswana.
Boitumelo ModiseBotswana National Veterinary Laboratory (BNVL), Private Bag 0035, Gaborone, Botswana.
Carter ThandaBotswana National Veterinary Laboratory (BNVL), Private Bag 0035, Gaborone, Botswana.
John F C NyangeBotswana National Veterinary Laboratory (BNVL), Private Bag 0035, Gaborone, Botswana.
Chandapiwa Marobela-RaborokgweBotswana National Veterinary Laboratory (BNVL), Private Bag 0035, Gaborone, Botswana.
Giovanni CattoliAnimal Production and Health Laboratory (APHL), United Nations Food and Agriculture Organisation (FAO)/International Atomic Energy Agency (IAEA) Agriculture and Biotechnology Laboratory, IAEA Laboratories, Friedenstrasse 1, 2444 Seibersdorf, Austria.
Charles E LamienAnimal Production and Health Laboratory (APHL), United Nations Food and Agriculture Organisation (FAO)/International Atomic Energy Agency (IAEA) Agriculture and Biotechnology Laboratory, IAEA Laboratories, Friedenstrasse 1, 2444 Seibersdorf, Austria.ORCID 0000-0003-1899-7614
Ian H BrownAnimal and Plant Health Agency (APHA)-Woodham Ln, Addlestone KT15 3NB, UK.
William G DundonAnimal Production and Health Laboratory (APHL), United Nations Food and Agriculture Organisation (FAO)/International Atomic Energy Agency (IAEA) Agriculture and Biotechnology Laboratory, IAEA Laboratories, Friedenstrasse 1, 2444 Seibersdorf, Austria.ORCID 0000-0002-2776-169X
Ashley C BanyardAnimal and Plant Health Agency (APHA)-Woodham Ln, Addlestone KT15 3NB, UK.ORCID 0000-0002-1286-9825
Botswana Vaccine Institute (Botswana) · BWAnimal and Plant Health Agency · GBInternational Atomic Energy Agency · ATMinistry of Agriculture · BW

Funding

NIAID Centers of Excellence for Influenza Research and Response: Universal Influenza Vaccine Research Activities75N93021C00015 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HENSLEY, SCOTT · 2021 to 2025
$50.7M
NIAID NIH HHS 75N93021C00015
6 · The paper itself

Abstract

Numerous outbreaks of high-pathogenicity avian influenza (HPAI) were reported during 2020-2021. In Africa, H5Nx has been detected in Benin, Burkina Faso, Nigeria, Senegal, Lesotho, Namibia and South Africa in both wild birds and poultry. Botswana reported its first outbreak of HPAI to the World Organisation for Animal Health (WOAH) in 2021. An H5N1 virus was detected in a fish eagle, doves, and chickens. Full genome sequence analysis revealed that the virus belonged to clade 2.3.4.4b and showed high identity within haemagglutinin (HA) and neuraminidase proteins (NA) for viruses identified across a geographically broad range of locations. The detection of H5N1 in Botswana has important implications for disease management, wild bird conservation, tourism, public health, economic empowerment of vulnerable communities and food security in the region.

Indexed as

Influenza A virusInfluenza A Virus, H5N1 SubtypeInfluenza in BirdsPoultry DiseasesAnimalsAnimals, WildBotswanaChickensPhylogenyPoultryVirulencedovesfish eagleH5N1high-pathogenicityhigh-pathogenicity avian influenzamass mortalitypoultry

Identifiers

PMID36560605
PMCPMC9788244
OpenAlexW4309723364

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.