Evidence map›Paper›PMID 36559643›Full record

ArticlePlants (Basel, Switzerland)2022

Mutation in the Endo-β-1,4-glucanase (KORRIGAN) Is Responsible for Thick Leaf Phenotype in Sorghum.

Lavanya Mendu, Gayani Jalathge, Kamalpreet Kaur Dhillon, Nagendra Pratap Singh, Vimal Kumar Balasubramanian, Rebecca Fewou, Dennis C Gitz, Junping Chen, Zhanguo Xin, Venugopal Mendu

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Novel Allelic Mutations inInternational journal of molecular sciences · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Lavanya MenduDepartment of Plant Sciences and Plant Pathology, Montana State University, Bozeman, MT 59717, USA.
Gayani JalathgeDepartment of Plant and Soil Science, Texas Tech University, Lubbock, TX 79409, USA.
Kamalpreet Kaur DhillonDepartment of Plant and Soil Science, Texas Tech University, Lubbock, TX 79409, USA.
Nagendra Pratap SinghDepartment of Plant Sciences and Plant Pathology, Montana State University, Bozeman, MT 59717, USA.
Vimal Kumar BalasubramanianDepartment of Plant and Soil Science, Texas Tech University, Lubbock, TX 79409, USA.
Rebecca FewouFaculty of Science, University of Angers, 49000 Angers, France.
Dennis C GitzU. S. Department of Agriculture, Agriculture Research Service, Lubbock, TX 79415, USA.
Junping ChenU. S. Department of Agriculture, Agriculture Research Service, Lubbock, TX 79415, USA.ORCID 0000-0001-9060-8017
Zhanguo XinU. S. Department of Agriculture, Agriculture Research Service, Lubbock, TX 79415, USA.
Venugopal MenduDepartment of Plant Sciences and Plant Pathology, Montana State University, Bozeman, MT 59717, USA.ORCID 0000-0002-4985-2672
Texas Tech University · USUnited States Department of Agriculture · USMontana State University · USUniversité d'Angers · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sorghum [Sorghum bicolor (L.) Moench] is an important crop for food, feed, and fuel production. Particularly, sorghum is targeted for cellulosic ethanol production. Extraction of cellulose from cell walls is a key process in cellulosic ethanol production, and understanding the components involved in cellulose synthesis is important for both fundamental and applied research. Despite the significance in the biofuel industry, the genes involved in sorghum cell wall biosynthesis, modification, and degradation have not been characterized. In this study, we have identified and characterized three allelic thick leaf mutants (thl1, thl2, and thl3). Bulked Segregant Analysis sequencing (BSAseq) showed that the causal mutation for the thl phenotype is in endo-1,4-β-glucanase gene (SbKOR1). Consistent with the causal gene function, the thl mutants showed decreased crystalline cellulose content in the stem tissues. The SbKOR1 function was characterized using Arabidopsis endo-1,4-β-glucanase gene mutant (rsw2-1). Complementation of Arabidopsis with SbKOR1 (native Arabidopsis promoter and overexpression by 35S promoter) restored the radial swelling phenotype of rsw2-1 mutant, proving that SbKOR1 functions as endo-1,4-β-glucanase. Overall, the present study has identified and characterized sorghum endo-1,4-β-glucanase gene function, laying the foundation for future research on cell wall biosynthesis and engineering of sorghum for biofuel production.

Indexed as

biofuelcell wallendo-1,4-β-glucanaseKORRIGANSbKORRIGANsorghumthick leaf (thl)

Identifiers

PMID36559643
PMCPMC9780866
OpenAlexW4311788726

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.