Evidence map›Paper›PMID 36557634›Full record

ArticleMicroorganisms2022

Generation and Utilization of a Monoclonal Antibody against Hepatitis B Virus Core Protein for a Comprehensive Interactome Analysis.

Yusuke Nakai, Kei Miyakawa, Yutaro Yamaoka, Yasuyoshi Hatayama, Mayuko Nishi, Hidefumi Suzuki, Hirokazu Kimura, Hidehisa Takahashi, Yayoi Kimura, Akihide Ryo

Open access · goldAbstract read
In one paragraph

Article in Microorganisms, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Yusuke NakaiDepartment of Microbiology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan.
Kei MiyakawaDepartment of Microbiology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan.
Yutaro YamaokaDepartment of Microbiology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan.
Yasuyoshi HatayamaDepartment of Microbiology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan.
Mayuko NishiDepartment of Microbiology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan.
Hidefumi SuzukiDepartment of Molecular Biology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan.
Hirokazu KimuraDepartment of Health Science, Gunma Paz University Graduate School, Takasaki 370-0006, Japan.
Hidehisa TakahashiDepartment of Molecular Biology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan.
Yayoi KimuraAdvanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan.
Akihide RyoDepartment of Microbiology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan.
Yokohama City University · JPGumma Paz College · JP

Funding

Japan Agency for Medical Research and Development JP21fk0310103Japan Agency for Medical Research and Development JP22fk0310507
6 · The paper itself

Abstract

Hepatitis B virus (HBV) core antigen (HBc) is a structural protein that forms the viral nucleocapsid and is involved in various steps of the viral replication cycle, but its role in the pathogenesis of HBV infection is still elusive. In this study, we generated a mouse monoclonal antibody (mAb) against HBc and used it in antibody-based in situ biotinylation analysis in order to identify host proteins that interact with HBc. HBc antigen was produced with a wheat germ cell-free protein synthesis system and used to immunize mice. Among the established hybridoma clones, a single clone (mAb #7) was selected and further characterized for its ability in the antibody-based in situ biotinylation analysis to collect host proteins that are in the vicinity of HBc. Using mass spectrometry, we identified 215 HBc-interacting host proteins, three of which bind HBc most significantly under hypoxic conditions. Our results indicate that mAb #7 can be used to systematically identify host proteins that interact with HBc under pathophysiological conditions, and thus may be useful to explore the molecular pathways involved in HBV-induced cytopathogenesis.

Indexed as

antibody-based in situ biotinylationHepatitis B virushypoxiainteractome analysismonoclonal antibody

Identifiers

PMID36557634
PMCPMC9783060
OpenAlexW4311049398

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.