Evidence map›Paper›PMID 36557313›Full record

ArticleMetabolites2022

ConCISE: Consensus Annotation Propagation of Ion Features in Untargeted Tandem Mass Spectrometry Combining Molecular Networking and

Zachary A Quinlan, Irina Koester, Allegra T Aron, Daniel Petras, Lihini I Aluwihare, Pieter C Dorrestein, Craig E Nelson, Linda Wegley Kelly

Open access · goldAbstract read
In one paragraph

Article in Metabolites, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

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  7. ACS central science · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Zachary A QuinlanScripps Institution of Oceanography, University of California San Diego, San Diego, CA 92093, USA.
Irina KoesterScripps Institution of Oceanography, University of California San Diego, San Diego, CA 92093, USA.
Allegra T AronDepartment of Chemistry and Biochemistry, University of Denver, Denver, CO 80210, USA.
Daniel PetrasCluster of Excellence "Controlling Microbes to Fight Infections" (CMFI), University of Tuebingen, 72074 Tuebingen, Germany.
Lihini I AluwihareScripps Institution of Oceanography, University of California San Diego, San Diego, CA 92093, USA.
Pieter C DorresteinSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA 92093, USA.
Craig E NelsonCenter for Microbial Oceanography, Research and Education, Department of Oceanography and Sea Grant College Program, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0003-2525-3496
Linda Wegley KellyScripps Institution of Oceanography, University of California San Diego, San Diego, CA 92093, USA.
Scripps Institution of Oceanography · USUniversity of California San Diego · USUniversity of Denver · USUniversity of Hawaiʻi at Mānoa · USUniversity of Tübingen · DE

Funding

Sources and Sins of Halogenated Organic Compounds in the Marine EnvironmentP01ES021921 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MOORE, BRADLEY S · 2012 to 2016
$1.9M
Blasker Environmental Grant of the San Diego Foundation BLSK201676272Gordon and Betty Moore Foundation MMI 6920National Science Foundation 2019252845National Science Foundation 2023298National Science Foundation OCE-1155269National Science Foundation OCE-1313747NIEHS NIH HHS P01-ES021921
6 · The paper itself

Abstract

Recent developments in molecular networking have expanded our ability to characterize the metabolome of diverse samples that contain a significant proportion of ion features with no mass spectral match to known compounds. Manual and tool-assisted natural annotation propagation is readily used to classify molecular networks; however, currently no annotation propagation tools leverage consensus confidence strategies enabled by hierarchical chemical ontologies or enable the use of new

Indexed as

annotation propagationCANOPUSdissolved organic mattermetabolomics

Identifiers

PMID36557313
PMCPMC9786801
OpenAlexW4312211995

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.