Evidence map›Paper›PMID 36555453›Full record

ArticleInternational journal of molecular sciences2022

Dysbiosis: An Indicator of COVID-19 Severity in Critically Ill Patients.

Silvia Cuenca, Zaida Soler, Gerard Serrano-Gómez, Zixuan Xie, Jordi Barquinero, Joaquim Roca, Jose-Maria Sirvent, Chaysavanh Manichanh

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 6 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Silvia CuencaIntensive Care Department (ICU), University Hospital of Girona Dr. Josep Trueta, Avda. França s/n, 17007 Girona, Spain.
Zaida SolerMedicine Department, Autonomous University of Barcelona (UAB), 08193 Cerdanyola del Vallès, Spain.ORCID 0000-0003-1709-8721
Gerard Serrano-GómezMedicine Department, Autonomous University of Barcelona (UAB), 08193 Cerdanyola del Vallès, Spain.ORCID 0000-0002-9447-3778
Zixuan XieMedicine Department, Autonomous University of Barcelona (UAB), 08193 Cerdanyola del Vallès, Spain.
Jordi BarquineroGene and Cell Therapy, VHIR, Vall d'Hebron Hospital Campus, Passeig Vall d'Hebron 119-129, 08035 Barcelona, Spain.
Joaquim RocaMolecular Biology Institute of Barcelona (IBMB), Spanish National Research Council (CSIC), 08028 Barcelona, Spain.
Jose-Maria SirventIntensive Care Department (ICU), University Hospital of Girona Dr. Josep Trueta, Avda. França s/n, 17007 Girona, Spain.
Chaysavanh ManichanhMedicine Department, Autonomous University of Barcelona (UAB), 08193 Cerdanyola del Vallès, Spain.ORCID 0000-0002-2287-4003
Universitat Autònoma de Barcelona · ESConsejo Superior de Investigaciones Científicas · ESHebron University · PSInstitut d'Investigació Biomèdica de Girona · ES

Funding

European Commission 812969Instituto de Salud Carlos III FI21/00262Instituto de Salud Carlos III PI17/00614Instituto de Salud Carlos III PI20/00130
6 · The paper itself

Abstract

Here, we examined the dynamics of the gut and respiratory microbiomes in severe COVID-19 patients in need of mechanical ventilation in the intensive care unit (ICU). We recruited 85 critically ill patients (53 with COVID-19 and 32 without COVID-19) and 17 healthy controls (HCs) and monitored them for up to 4 weeks. We analyzed the bacterial and fungal taxonomic profiles and loads of 232 gut and respiratory samples and we measured the blood levels of Interleukin 6, IgG, and IgM in COVID-19 patients. Upon ICU admission, the bacterial composition and load in the gut and respiratory samples were altered in critically ill patients compared with HCs. During their ICU stay, the patients experienced increased bacterial and fungal loads, drastic decreased bacterial richness, and progressive changes in bacterial and fungal taxonomic profiles. In the gut samples, six bacterial taxa could discriminate ICU-COV(+) from ICU-COV(-) cases upon ICU admission and the bacterial taxa were associated according to age, PaO2/FiO2, and CRP levels. In the respiratory samples of the ICU-COV(+) patients, bacterial signatures including

Indexed as

COVID-19Critical IllnessDysbiosisHumansIntensive Care UnitsSARS-CoV-2bacterial and fungal microbiomecomposition and loadgut and lungmechanical ventilationsevere COVID-19 cases in ICU

Identifiers

PMID36555453
PMCPMC9779860
OpenAlexW4311376335

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.