Evidence map›Paper›PMID 36555390›Full record

ArticleInternational journal of molecular sciences2022

Spectrum of Genes for Non-

Olga Shatokhina, Nailya Galeeva, Anna Stepanova, Tatiana Markova, Maria Lalayants, Natalia Alekseeva, George Tavarkiladze, Tatiana Markova, Liudmila Bessonova, Marina Petukhova and 5 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. A Comparative Evaluation of the Genetic Variant Spectrum in theInternational journal of molecular sciences · 2024
    Article
  3. Article
  4. TheGenes · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Olga ShatokhinaFederal State Budgetary Institution "Research Centre For Medical Genetics", 115478 Moscow, Russia.ORCID 0000-0003-0351-1271
Nailya GaleevaFederal State Budgetary Institution "Research Centre For Medical Genetics", 115478 Moscow, Russia.
Anna StepanovaFederal State Budgetary Institution "Research Centre For Medical Genetics", 115478 Moscow, Russia.
Tatiana MarkovaFederal State Budgetary Institution of Science "National Research Centre for Audiology and Hearing Rehabilitation", 117513 Moscow, Russia.
Maria LalayantsFederal State Budgetary Institution of Science "National Research Centre for Audiology and Hearing Rehabilitation", 117513 Moscow, Russia.
Natalia AlekseevaFederal State Budgetary Institution of Science "National Research Centre for Audiology and Hearing Rehabilitation", 117513 Moscow, Russia.
George TavarkiladzeFederal State Budgetary Institution of Science "National Research Centre for Audiology and Hearing Rehabilitation", 117513 Moscow, Russia.ORCID 0000-0003-0118-908X
Tatiana MarkovaFederal State Budgetary Institution "Research Centre For Medical Genetics", 115478 Moscow, Russia.ORCID 0000-0002-2672-6294
Liudmila BessonovaFederal State Budgetary Institution "Research Centre For Medical Genetics", 115478 Moscow, Russia.
Marina PetukhovaFederal State Budgetary Institution "Research Centre For Medical Genetics", 115478 Moscow, Russia.
Daria GusevaFederal State Budgetary Institution "Research Centre For Medical Genetics", 115478 Moscow, Russia.
Inga AnisimovaFederal State Budgetary Institution "Research Centre For Medical Genetics", 115478 Moscow, Russia.
Alexander PolyakovFederal State Budgetary Institution "Research Centre For Medical Genetics", 115478 Moscow, Russia.
Oxana RyzhkovaFederal State Budgetary Institution "Research Centre For Medical Genetics", 115478 Moscow, Russia.ORCID 0000-0003-1285-9093
Elena BliznetzFederal State Budgetary Institution "Research Centre For Medical Genetics", 115478 Moscow, Russia.
Research Centre for Medical Genetics · RURussian Medical Academy of Continuous Professional Education · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hearing loss is one of the most genetically heterogeneous disorders known. Over 120 genes are reportedly associated with non-syndromic hearing loss (NSHL). To date, in Russia, there have been relatively few studies that apply massive parallel sequencing (MPS) methods to elucidate the genetic factors underlying non-GJB2-related hearing loss cases. The current study is intended to provide an understanding of the mutation spectrum in non-GJB2-related hearing loss in a cohort of Russian sensorineural NSHL patients and establish the best diagnostic algorithm. Genetic testing using an MPS panel, which included 33 NSHL and syndromic hearing loss (SHL) genes that might be misdiagnosed as NSHL genes, was completed on 226 sequentially accrued and unrelated patients. As a result, the molecular basis of deafness was found in 21% of the non-GJB2 NSHL cases. The total contribution pathogenic, and likely pathogenic, variants in the genes studied among all hereditary NSHL Russian patients was 12%. STRC pathogenic and likely pathogenic, variants accounted for 30% of diagnoses in GJB2-negative patients, providing the most common diagnosis. The majority of causative mutations in STRC involved large copy number variants (CNVs) (80%). Among the point mutations, the most common were c.11864G>A (p.Trp3955*) in the USH2A gene, c.2171_2174delTTTG (p.Val724Glyfs*6) in the STRC gene, and c.107A>C (p.His36Pro) and c.1001G>T (p.Gly334Val) in the SLC26A4 gene. Pathogenic variants in genes involved in SHL accounted for almost half of the cases with an established molecular genetic diagnosis, which were 10% of the total cohort of patients with non-GJB2-related hearing loss.

Indexed as

DeafnessHearing LossHearing Loss, SensorineuralConnexin 26ConnexinsHumansIntercellular Signaling Peptides and ProteinsMutationConnexin 26ConnexinsIntercellular Signaling Peptides and ProteinsSTRC protein, humanhearing lossMPSnon-GJB2 relatednon-syndromicpanel sequencing

Identifiers

PMID36555390
PMCPMC9779600
OpenAlexW4311153963

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.