Evidence map›Paper›PMID 36553551›Full record

ArticleGenes2022

Genome-Wide Identification and Expression Analysis of m6A Writers, Erasers, and Readers in Litchi (

Liwen Tang, Jiali Xue, Xingyu Ren, Yue Zhang, Liqing Du, Feng Ding, Kaibing Zhou, Wuqiang Ma

Open access · goldAbstract read
In one paragraph

Article in Genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Identification and Functional Exploration of theInternational journal of molecular sciences · 2025
    Article
  6. Genome-Wide Identification and Expression Analysis of mInternational journal of molecular sciences · 2025
    Article
  7. Article
  8. The mProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Identification of mBiochemistry and biophysics reports · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Liwen TangSanya Nanfan Research Institute of Hainan University, Sanya 572025, China.
Jiali XueSanya Nanfan Research Institute of Hainan University, Sanya 572025, China.
Xingyu RenSanya Nanfan Research Institute of Hainan University, Sanya 572025, China.
Yue ZhangSanya Nanfan Research Institute of Hainan University, Sanya 572025, China.
Liqing DuKey Laboratory of Tropical Fruit Biology, Ministry of Agriculture & Rural Affairs, South Subtropical Crops Research Institute of Chinese Academy of Tropical Agricultural Sciences, Zhanjiang 524091, China.
Feng DingGuangxi Crop Genetic Improvement and Biotechnology Key Laboratory, Guangxi Academy of Agricultural Sciences, Nanning 530007, China.
Kaibing ZhouSanya Nanfan Research Institute of Hainan University, Sanya 572025, China.ORCID 0000-0002-7421-7240
Wuqiang MaSanya Nanfan Research Institute of Hainan University, Sanya 572025, China.ORCID 0000-0003-0191-451X
Hainan University · CNChinese Academy of Tropical Agricultural Sciences · CNGuangxi Academy of Agricultural Science · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

N6-methyladenosine (m6A) RNA modification is the most prevalent type of RNA methylation and plays a pivotal role in the development of plants. However, knowledge of the m6A modification in litchi remains limited. In this study, a complete analysis of m6A writers, erasers, and readers in litchi was performed and 31 litchi m6A regulatory genes were identified in total, including 7 m6A writers, 12 m6A erases, and 12 readers. Phylogeny analysis showed that all three of the kinds of litchi m6A regulatory proteins could be divided into three groups; domains and motifs exhibited similar patterns in the same group. MiRNA target site prediction showed that 77 miRNA target sites were located in 25 (80.6%) litchi m6A regulatory genes. Cis-elements analysis exhibited that litchi m6A regulatory genes were mainly responsive to light and plant hormones, followed by environmental stress and plant development. Expression analysis revealed litchi m6A regulatory genes might play an important role during the peel coloration and fruit abscission of litchi. This study provided valuable and expectable information of litchi m6A regulatory genes and their potential epigenetic regulation mechanism in litchi.

Indexed as

LitchiMicroRNAsEpigenesis, GeneticFruitPlantsMicroRNAserasersexpression analysisfruit abscissionfruit colorationlitchim6A modificationreaderswriters

Identifiers

PMID36553551
PMCPMC9777543
OpenAlexW4311521203

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.