Evidence map›Paper›PMID 36552809›Full record

ArticleCells2022

Real-Time Characterization of Clonal Fate Decisions in Complex Leukemia Samples by Fluorescent Genetic Barcoding.

Tobias Maetzig, Anna Lieske, Nicole Dörpmund, Michael Rothe, Marc-Jens Kleppa, Violetta Dziadek, Jacob Jalil Hassan, Julia Dahlke, Dorit Borchert, Axel Schambach

Open access · goldAbstract read
In one paragraph

Article in Cells, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Tobias MaetzigInstitute of Experimental Hematology, Hannover Medical School, 30625 Hannover, Germany.ORCID 0000-0001-8259-3150
Anna LieskeInstitute of Experimental Hematology, Hannover Medical School, 30625 Hannover, Germany.
Nicole DörpmundInstitute of Experimental Hematology, Hannover Medical School, 30625 Hannover, Germany.
Michael RotheInstitute of Experimental Hematology, Hannover Medical School, 30625 Hannover, Germany.ORCID 0000-0002-6813-4705
Marc-Jens KleppaInstitute of Experimental Hematology, Hannover Medical School, 30625 Hannover, Germany.ORCID 0000-0003-4626-3300
Violetta DziadekInstitute of Experimental Hematology, Hannover Medical School, 30625 Hannover, Germany.
Jacob Jalil HassanInstitute of Experimental Hematology, Hannover Medical School, 30625 Hannover, Germany.
Julia DahlkeInstitute of Experimental Hematology, Hannover Medical School, 30625 Hannover, Germany.
Dorit BorchertDepartment of Pediatric Hematology and Oncology, Hannover Medical School, 30625 Hannover, Germany.
Axel SchambachInstitute of Experimental Hematology, Hannover Medical School, 30625 Hannover, Germany.
Medizinische Hochschule Hannover · DEBoston Children's Hospital · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clonal heterogeneity in acute myeloid leukemia (AML) forms the basis for treatment failure and relapse. Attempts to decipher clonal evolution and clonal competition primarily depend on deep sequencing approaches. However, this prevents the experimental confirmation of the identified disease-relevant traits on the same cell material. Here, we describe the development and application of a complex fluorescent genetic barcoding (cFGB) lentiviral vector system for the labeling and subsequent multiplex tracking of up to 48 viable AML clones by flow cytometry. This approach allowed the visualization of longitudinal changes in the in vitro growth behavior of multiplexed color-coded AML clones for up to 137 days. Functional studies of flow cytometry-enriched clones documented their stably inherited increase in competitiveness, despite the absence of growth-promoting mutations in exome sequencing data. Transplantation of aliquots of a color-coded AML cell mix into mice revealed the initial engraftment of similar clones and their subsequent differential distribution in the animals over time. Targeted RNA-sequencing of paired pre-malignant and de novo expanded clones linked gene sets associated with Myc-targets, embryonic stem cells, and RAS signaling to the foundation of clonal expansion. These results demonstrate the potency of cFGB-mediated clonal tracking for the deconvolution of verifiable driver-mechanisms underlying clonal selection in leukemia.

Indexed as

Leukemia, Myeloid, AcuteAnimalsClonal EvolutionClone CellsMiceMutationPhenotypeacute myeloid leukemiaclonal trackingflow cytometryfluorescent genetic barcoding

Identifiers

PMID36552809
PMCPMC9776743
OpenAlexW4311510516

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.