Evidence map›Paper›PMID 36552780›Full record

ArticleCells2022

The Parallel Presentation of Two Functional CTL Epitopes Derived from the O and Asia 1 Serotypes of Foot-and-Mouth Disease Virus and Swine SLA-2*HB01: Implications for Universal Vaccine Development.

Lei Feng, Yong-Yu Gao, Mingwei Sun, Zi-Bin Li, Qiang Zhang, Jie Yang, Cui Qiao, Hang Jin, Hong-Sheng Feng, Yu-Han Xian and 4 more

Open access · goldAbstract read
In one paragraph

Article in Cells, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Lei FengDepartment of Bioengineering, College of Life and Health, Dalian University, Dalian 116622, China.
Yong-Yu GaoDepartment of Bioengineering, College of Life and Health, Dalian University, Dalian 116622, China.
Mingwei SunCAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences (CAS), Beijing 100101, China.
Zi-Bin LiDepartment of Bioengineering, College of Life and Health, Dalian University, Dalian 116622, China.
Qiang ZhangState Key Laboratory of Veterinary Etiological Biology, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Lanzhou 730046, China.
Jie YangDepartment of Bioengineering, College of Life and Health, Dalian University, Dalian 116622, China.
Cui QiaoDepartment of Bioengineering, College of Life and Health, Dalian University, Dalian 116622, China.
Hang JinDepartment of Bioengineering, College of Life and Health, Dalian University, Dalian 116622, China.
Hong-Sheng FengDepartment of Bioengineering, College of Life and Health, Dalian University, Dalian 116622, China.
Yu-Han XianDepartment of Bioengineering, College of Life and Health, Dalian University, Dalian 116622, China.
Jianxun QiCAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences (CAS), Beijing 100101, China.ORCID 0000-0002-9358-4732
George F GaoCAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences (CAS), Beijing 100101, China.
William J LiuNHC Key Laboratory of Biosafety, Research Unit of Adaptive Evolution and Control of Emerging Viruses, Chinese Academy of Medical Sciences, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China.
Feng-Shan GaoDepartment of Bioengineering, College of Life and Health, Dalian University, Dalian 116622, China.
Dalian University · CNChinese Academy of Sciences · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNLanzhou Veterinary Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Foot-and-mouth disease virus (FMDV) poses a significant threat to the livestock industry. Through their recognition of the conserved epitopes presented by the swine leukocyte antigen (SLA), T cells play a pivotal role in the antiviral immunity of pigs. Herein, based on the peptide binding motif of SLA-2*HB01, from an original SLA-2 allele, a series of functional T-cell epitopes derived from the dominant antigen VP1 of FMDV with high binding capacity to SLA-2 were identified. Two parallel peptides, Hu64 and As64, from the O and Asia I serotypes, respectively, were both crystallized with SLA-2*HB01. Compared to SLA-1 and SLA-3, the SLA-2 structures showed the flexibility of residues in the P4, P6, and P8 positions and in their potential interface with TCR. Notably, the peptides Hu64 and As64 adopted quite similar overall conformation when bound to SLA-2*HB01. Hu64 has two different conformations, a more stable 'chair' conformation and an unstable 'boat' conformation observed in the two molecules of one asymmetric unit, whereas only a single 'chair' conformation was observed for As64. Both Hu64 and As64 could induce similar dominant T-cell activities. Our interdisciplinary study establishes a basis for the in-depth interpretation of the peptide presentation of SLA-I, which can be used toward the development of universal vaccines.

Indexed as

Foot-and-Mouth Disease VirusAnimalsEpitopes, T-LymphocyteHistocompatibility Antigens Class IPeptidesSerogroupSwineEpitopes, T-LymphocyteHistocompatibility Antigens Class IPeptidesswine leukocyte antigencrystalCTLepitopefoot-and-mouth disease viruspeptideSLA-2universal vaccine candidate

Identifiers

PMID36552780
PMCPMC9777387
OpenAlexW4311154657

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.