Evidence map›Paper›PMID 36552441›Full record

ArticleAnimals : an open access journal from MDPI2022

Genome-Wide Association Study for Body Conformation Traits and Fitness in Czech Holsteins.

Jindřich Čítek, Michaela Brzáková, Jiří Bauer, Ladislav Tichý, Zuzana Sztankóová, Luboš Vostrý, Yvette Steyn

Abstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jindřich ČítekDepartment of Genetics and Agricultural Biotechnology, Faculty of Agriculture, University of South Bohemia in České Budějovice, Studentská 1668, 370 05 České Budějovice, Czech Republic.ORCID 0000-0003-4305-9160
Michaela BrzákováInstitute of Animal Science, Přátelství 815, 104 00 Praha, Czech Republic.ORCID 0000-0002-7510-3480
Jiří BauerCzech Moravian Breeders' Corporation, Benešovská 123, 252 09 Hradištko, Czech Republic.
Ladislav TichýInstitute of Animal Science, Přátelství 815, 104 00 Praha, Czech Republic.
Zuzana SztankóováInstitute of Animal Science, Přátelství 815, 104 00 Praha, Czech Republic.
Luboš VostrýFaculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences Prague, 165 00 Praha, Czech Republic.ORCID 0000-0001-9778-980X
Yvette SteynDepartment of Animal and Dairy Science, University of Georgia, 425 River Road, Athens, GA 30602, USA.

Funding

Ministry of Agriculture MZE-RO0718Ministry of Agriculture NAZV QK1910320Ministry of Education Youth and Sports LTAUSA19117South Bohemia University project GAJU 005/2022/Z
6 · The paper itself

Abstract

The aim of this study was a genome-wide association study (GWAS) on conformation traits using 25,486 genotyped Czech Holsteins, with 35,227 common SNPs for each genotype. Linear trait records were collected between 1995 and 2020. The Interbull information from Multiple Across Country Evaluation (MACE) was included for bulls that mostly had daughter records in a foreign country. When using the Bonferroni correction, the number of SNPs that were either significant or approached the significance threshold was low-dairy capacity composite on BTA4, feet and legs composite BTA21, total score BTA10, stature BTA24, body depth BTA6, angularity BTA20, fore udder attachment BTA10. Without the Bonferroni correction, the total number of significant or near of significance SNPs was 32. The SNPs were localized on BTA1,2,4,5,6,7,8,18,22,25,26,28 for dairy capacity composite, BTA15,21 for feet and legs composite, BTA10 for total score, BTA24 stature, BTA6,23 body depth, BTA20 angularity, BTA2 rump angle, BTA9,10 rear legs rear view, BTA2,19 rear legs side view, BTA10 fore udder attachment, BTA2 udder depth, BTA10 rear udder height, BTA12 central alignment, BTA24 rear teat placement, BTA8,29 rear udder width. The results provide biological information for the improvement of body conformation and fitness in the Holstein population.

Indexed as

body conformationcattledairy capacityfeet and legsGWASHolsteinSNPwssGBLUP

Identifiers

PMID36552441
PMCPMC10375906

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.