Evidence map›Paper›PMID 36552360›Full record

ArticleBiology2022

Identify Biomarkers and Design Effective Multi-Target Drugs in Ovarian Cancer: Hit Network-Target Sets Model Optimizing.

Amir Abbas Esmaeilzadeh, Mahdis Kashian, Hayder Mahmood Salman, Marwa Fadhil Alsaffar, Mustafa Musa Jaber, Siamak Soltani, Ahmet Ilhan, Abolfazl Bahrami

RetractedErratum issuedOpen access · goldAbstract readRetracted Publication
In one paragraph

Article in Biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 4 countries.

Amir Abbas EsmaeilzadehSalamat yar Behesht Dayan, Dayan Biotech Company, Tehran 14531, Iran.ORCID 0000-0001-9025-1425
Mahdis KashianDepartment of Obstetrics and Gynecology, Medical College of Iran University, Tehran 14535, Iran.
Hayder Mahmood SalmanDepartment of Computer Science, Al-Turath University College Al Mansour, Baghdad 10011, Iraq.
Marwa Fadhil AlsaffarMedical Laboratory Techniques Department, AL-Mustaqbal University College, Hillah 51001, Iraq.
Mustafa Musa JaberComputer Techniques Engineering Department, Dijlah University College, Baghdad 00964, Iraq.
Siamak SoltaniDepartment of Forensic Medicine, School of Medicine, Iran University of Medical Sciences, Tehran 14535, Iran.
Ahmet IlhanDepartment of Medical Biochemistry, Faculty of Medicine, Cukurova University, Adana 01330, Turkey.
Abolfazl BahramiDepartment of Animal Science, College of Agriculture and Natural Resources, University of Tehran, Karaj 1417643184, Iran.ORCID 0000-0001-7330-4134
Iran University of Medical Sciences · IRAl-Turath University · IQCukurova University · TRDijlah University College · IQUniversity of Tehran · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epithelial ovarian cancer (EOC) is highly aggressive with poor patient outcomes, and a deeper understanding of ovarian cancer tumorigenesis could help guide future treatment development. We proposed an optimized hit network-target sets model to systematically characterize the underlying pathological mechanisms and intra-tumoral heterogeneity in human ovarian cancer. Using TCGA data, we constructed an epithelial ovarian cancer regulatory network in this study. We use three distinct methods to produce different HNSs for identification of the driver genes/nodes, core modules, and core genes/nodes. Following the creation of the optimized HNS (OHNS) by the integration of DN (driver nodes), CM (core module), and CN (core nodes), the effectiveness of various HNSs was assessed based on the significance of the network topology, control potential, and clinical value. Immunohistochemical (IHC), qRT-PCR, and Western blotting were adopted to measure the expression of hub genes and proteins involved in epithelial ovarian cancer (EOC). We discovered that the OHNS has two key advantages: the network's central location and controllability. It also plays a significant role in the illness network due to its wide range of capabilities. The OHNS and clinical samples revealed the endometrial cancer signaling, and the PI3K/AKT, NER, and BMP pathways. MUC16, FOXA1, FBXL2, ARID1A, COX15, COX17, SCO1, SCO2, NDUFA4L2, NDUFA, and PTEN hub genes were predicted and may serve as potential candidates for new treatments and biomarkers for EOC. This research can aid in better capturing the disease progression, the creation of potent multi-target medications, and the direction of the therapeutic community in the optimization of effective treatment regimens by various research objectives in cancer treatment.

Indexed as

core modulecore nodesdriver genesEOCepithelial ovarian cancerhit network-target setsnetwork control

Identifiers

PMID36552360
PMCPMC9776135
OpenAlexW4312140842

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.