Evidence map›Paper›PMID 36552284›Full record

ArticleBiology2022

Genomics, Origin and Selection Signals of Loudi Cattle in Central Hunan.

Liangliang Jin, Baizhong Zhang, Jing Luo, Jianbo Li, Juyong Liang, Wanghe Wu, Yongzhong Xie, Fuqiang Li, Chuzhao Lei, Kangle Yi

Open access · goldAbstract read
In one paragraph

Article in Biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Liangliang JinHunan Institute of Animal and Veterinary Science, Changsha 410130, China.ORCID 0000-0002-4084-2638
Baizhong ZhangHunan Institute of Animal and Veterinary Science, Changsha 410130, China.
Jing LuoQinghai Academy of Animal Science and Veterinary Medicine, Qinghai University, Xining 810016, China.
Jianbo LiHunan Institute of Animal and Veterinary Science, Changsha 410130, China.
Juyong LiangAnimal Husbandry and Fishery Affairs Center of Lianyuan City, Loudi 417100, China.
Wanghe WuAnimal Husbandry and Fishery Affairs Center of Lianyuan City, Loudi 417100, China.
Yongzhong XieAnimal Husbandry and Fishery Affairs Center of Lianyuan City, Loudi 417100, China.
Fuqiang LiHunan Tianhua Industrial Co., Ltd., Lianyuan 417126, China.
Chuzhao LeiKey Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, Xianyang 712100, China.
Kangle YiHunan Institute of Animal and Veterinary Science, Changsha 410130, China.
Hunan Academy of Agricultural Sciences · CNNorthwest A&F University · CNQinghai University · CN

Funding

China Agriculture Research System of MOF and MARA CARS-37Innovation platform and talent plan of Hunan Province, China No. 2019TP 2010The key research and development project of Hunan Province, China No. 2020NK 2066
6 · The paper itself

Abstract

Due to the geographical, cultural and environmental variability in Xiangxi, China, distinctive indigenous cattle populations have formed. Among them, Loudi cattle and Xiangxi cattle are the local cattle in Hunan, and the environment in Loudi is relatively more enclosed and humid than that in Xiangxi. To study the genome and origin of Loudi cattle in hot and humid environments, 29 individuals were collected and sequenced by whole-genome resequencing. In addition, genomic data were obtained from public databases for 96 individuals representing different cattle breeds worldwide, including 23 Xiangxi cattle from western Hunan. Genetic analysis indicated that the genetic diversity of Loudi cattle was close to that of Chinese cattle and higher than that of other breeds. Population structure and ancestral origin analysis indicated the relationship between Loudi cattle and other breeds. Loudi has four distinctive seasons, with a stereoscopic climate and extremely rich water resources. Selective sweep analysis revealed candidate genes and pathways associated with environmental adaptation and homeostasis. Our findings provide a valuable source of information on the genetic diversity of Loudi cattle and ideas for population conservation and genome-associated breeding of local cattle in today's extreme climate environment.

Indexed as

admixture eventsgenetic diversityhybrid cattlewhole-genome resequencing

Identifiers

PMID36552284
PMCPMC9775101
OpenAlexW4312091059

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.