Evidence map›Paper›PMID 36551712›Full record

ArticleCancers2022

Correlation between DNA Methylation and Cell Proliferation Identifies New Candidate Predictive Markers in Meningioma.

Sébastien Hergalant, Chloé Saurel, Marion Divoux, Fabien Rech, Celso Pouget, Catherine Godfraind, Pierre Rouyer, Stéphanie Lacomme, Shyue-Fang Battaglia-Hsu, Guillaume Gauchotte

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Sébastien HergalantUMR Inserm 1256 NGERE (Nutrition, Génétique et Exposition aux Risques Environnementaux), Université de Lorraine, 54000 Nancy, France.ORCID 0000-0001-8456-7992
Chloé SaurelDepartment of Biopathology CHRU-ICL, CHRU, 54500 Nancy, France.
Marion DivouxUMR Inserm 1256 NGERE (Nutrition, Génétique et Exposition aux Risques Environnementaux), Université de Lorraine, 54000 Nancy, France.ORCID 0000-0002-5946-311X
Fabien RechDepartment of Neurosurgery, CHRU, 54500 Nancy, France.
Celso PougetDepartment of Biopathology CHRU-ICL, CHRU, 54500 Nancy, France.
Catherine GodfraindNeuropathology, CHU of Clermont-Ferrand, UMR INSERM/Université d'Auvergne U1071, 63000 Clermont-Ferrand, France.
Pierre RouyerUMR Inserm 1256 NGERE (Nutrition, Génétique et Exposition aux Risques Environnementaux), Université de Lorraine, 54000 Nancy, France.ORCID 0000-0001-8298-5234
Stéphanie LacommeCentre de Ressources Biologiques, BB-0033-00035, CHRU, 54500 Nancy, France.ORCID 0000-0002-0923-0692
Shyue-Fang Battaglia-HsuCRAN, CNRS, Université de Lorraine, 54000 Nancy, France.ORCID 0000-0002-5881-6251
Guillaume GauchotteUMR Inserm 1256 NGERE (Nutrition, Génétique et Exposition aux Risques Environnementaux), Université de Lorraine, 54000 Nancy, France.ORCID 0000-0001-5585-9195
Inserm · FRCentre National de la Recherche Scientifique · FRInstitut de Cancérologie de Lorraine · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Meningiomas are the most common primary tumors of the central nervous system. Based on the 2021 WHO classification, they are classified into three grades reflecting recurrence risk and aggressiveness. However, the WHO's histopathological criteria defining these grades are somewhat subjective. Together with reliable immunohistochemical proliferation indices, other molecular markers such as those studied with genome-wide epigenetics promise to revamp the current prognostic classification. In this study, 48 meningiomas of various grades were randomly included and explored for DNA methylation with the Infinium MethylationEPIC microarray over 850k CpG sites. We conducted differential and correlative analyses on grade and several proliferation indices and markers, such as mitotic index and Ki-67 or MCM6 immunohistochemistry. We also set up Cox proportional hazard models for extensive associations between CpG methylation and survival. We identified loci highly correlated with cell growth and a targeted methylation signature of regulatory regions persistently associated with proliferation, grade, and survival. Candidate genes under the control of these regions include

Indexed as

biomarkersgenome-wide DNA methylationKi-67MCM6meningiomamethylomeproliferation signaturesurvival

Identifiers

PMID36551712
PMCPMC9776514
OpenAlexW4312140592

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.