Evidence map›Paper›PMID 36550414›Full record

ArticleBMC microbiology2022

Transcriptional responses of human intestinal epithelial HT-29 cells to spore-displayed p40 derived from Lacticaseibacillus rhamnosus GG.

Soo Ji Kang, Jeong A Moon, Do Yeong Son, Kwang Won Hong

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Soo Ji Kang *Department of Food Science and Biotechnology, College of Life Science and Biotechnology, Dongguk University, Goyang-si, 10326, Republic of Korea.
Jeong A Moon *Department of Food Science and Biotechnology, College of Life Science and Biotechnology, Dongguk University, Goyang-si, 10326, Republic of Korea.
Do Yeong SonDepartment of Food Science and Biotechnology, College of Life Science and Biotechnology, Dongguk University, Goyang-si, 10326, Republic of Korea.
Kwang Won HongDepartment of Food Science and Biotechnology, College of Life Science and Biotechnology, Dongguk University, Goyang-si, 10326, Republic of Korea. hkwon@dongguk.edu.ORCID 0000-0001-8717-8036
Dongguk University · KR

Funding

National Research Foundation of Korea NRF-2018R1D1A1A02086040
6 · The paper itself

Abstract

backgroundsThe aims of this study were to construct spore-displayed p40, a Lacticaseibacillus rhamnosus GG-derived soluble protein, using spore surface display technology and to evaluate transcriptional responses in human intestinal epithelial cells.

resultsp40 was displayed on the surface of Bacillus subtilis spores using spore coat protein CotG as an anchor protein. Effects of spore-displayed p40 (CotG-p40) on gene expression of intestinal epithelial cell line HT-29 were evaluated by transcriptome analysis using RNA-sequencing. As a result of differentially expressed gene (DEG) analysis, 81 genes were up-regulated and 82 genes were down-regulated in CotG-p40 stimulated cells than in unstimulated cells. Gene ontology enrichment analysis showed that CotG-p40 affected biological processes such as developmental process, metabolic process, cell surface receptor linked signaling pathway, and retinoic acid metabolic process. Gene-gene network analysis suggested that 10 DEGs (EREG, FOXF1, GLI2, PTGS2, SPP1, MMP19, TNFRSF1B, PTGER4, CLDN18, and ALDH1A3) activated by CotG-p40 were associated with probiotic action.

conclusionsThis study demonstrates the regulatory effects of CotG-p40 on proliferation and homeostasis of HT-29 cells. This study provided comprehensive insights into the transcriptional response of human intestinal epithelial cells stimulated by CotG-p40.

Indexed as

LacticaseibacillusLacticaseibacillus rhamnosusBacillus subtilisBacterial ProteinsClaudinsEpithelial CellsHT29 CellsHumansSpores, BacterialBacterial ProteinsClaudinsCLDN18 protein, humanDifferentially expressed genesHT-29 cellsp40 proteinRNA-sequencingSpore surface display

Identifiers

PMID36550414
PMCPMC9772600
OpenAlexW4312190921

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.