Evidence map›Paper›PMID 36547579›Full record

ArticleJournal of fungi (Basel, Switzerland)2022

Invasion and Colonization of Pathogenic

Nancy Bhagat, Shanu Magotra, Rikita Gupta, Shikha Sharma, Sandhya Verma, Praveen Kumar Verma, Tahir Ali, Ankita Shree, Jyoti Vakhlu

Open access · goldAbstract read
In one paragraph

Article in Journal of fungi (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Effects of biocontrolFEMS microbes · 2024
    Article
  3. A TaqManBiology · 2023
    Article
  4. Article
  5. Plant-PathogenicJournal of fungi (Basel, Switzerland) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Nancy BhagatMetagenomic Laboratory, School of Biotechnology, University of Jammu, Jammu 180006, India.
Shanu MagotraMetagenomic Laboratory, School of Biotechnology, University of Jammu, Jammu 180006, India.
Rikita GuptaMetagenomic Laboratory, School of Biotechnology, University of Jammu, Jammu 180006, India.
Shikha SharmaMetagenomic Laboratory, School of Biotechnology, University of Jammu, Jammu 180006, India.
Sandhya VermaPlant Immunity Laboratory, National Institute of Plant Genome Research (NIPGR), New Delhi 110067, India.ORCID 0000-0002-9547-6786
Praveen Kumar VermaPlant Immunity Laboratory, National Institute of Plant Genome Research (NIPGR), New Delhi 110067, India.
Tahir AliMetagenomic Laboratory, School of Biotechnology, University of Jammu, Jammu 180006, India.
Ankita ShreePlant Immunity Laboratory, National Institute of Plant Genome Research (NIPGR), New Delhi 110067, India.ORCID 0000-0002-7412-0211
Jyoti VakhluMetagenomic Laboratory, School of Biotechnology, University of Jammu, Jammu 180006, India.
University of Jammu · INNational Institute of Plant Genome Research · INChandigarh University · INJawaharlal Nehru University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The corm rot of saffron caused by Fusarium oxysporum (Fox) has been reported to be the most destructive fungal disease of the herb globally. The pathogen, Fusarium oxysporum R1 (Fox R1) isolated by our group from Kashmir, India, was found to be different from Fusarium oxysporum f.sp. gladioli commonly reported corm rot agent of saffron. In the present study, Fox R1 was further characterized using housekeeping genes and pathogenicity tests, as Fusarium oxysporum R1 f.sp. iridacearum race 4. Though Fox R1 invaded the saffron plant through both corm and roots, the corm was found to be the preferred site of infection. In addition, the route of pathogen movement wastracked by monitoring visual symptoms, semi-quantitative PCR, quantitative-PCR (q-PCR), real-time imaging of egfp-tagged Fusarium oxysporum R1, and Fox R1 load quantification. This study is the first study of its kind on the bidirectional pathogenesis from corm to roots and vice-versa, as the literature only reports unidirectional upward movement from roots to other parts of the plant. In addition, the colonization pattern of Fox R1 in saffron corms and roots was studied. The present study involved a systematic elucidation of the mode and mechanism of pathogenesis in the saffron Fusarium oxysporum strain R1 pathosystem.

Indexed as

corm-rot of saffronCrocus sativusFusarium oxysporumhousekeeping genesmolecular identification

Identifiers

PMID36547579
PMCPMC9784501
OpenAlexW4310230746

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.