Evidence map›Paper›PMID 36547568›Full record

ArticleJournal of fungi (Basel, Switzerland)2022

Genome Organization and Copy-Number Variation Reveal Clues to Virulence Evolution in

Claire A Dubin, Mark Voorhies, Anita Sil, Marcus M Teixeira, Bridget M Barker, Rachel B Brem

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of fungi (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Computational Approaches for Discovering Virulence Factors inJournal of fungi (Basel, Switzerland) · 2025
    Review
  3. From soil to clinic: current advances in understandingMicrobiology and molecular biology reviews : MMBR · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Claire A DubinDepartment of Plant and Microbial Biology, UC Berkeley, Berkeley, CA 94720-3102, USA.
Mark VoorhiesDepartment of Microbiology and Immunology, UC San Francisco, San Francisco, CA 94143, USA.ORCID 0000-0001-8815-7384
Anita SilDepartment of Microbiology and Immunology, UC San Francisco, San Francisco, CA 94143, USA.
Marcus M TeixeiraThe Translational Genomics Research Institute (TGen)-Affiliate of City of Hope, Flagstaff, AZ 85004, USA.ORCID 0000-0003-1763-3464
Bridget M BarkerThe Translational Genomics Research Institute (TGen)-Affiliate of City of Hope, Flagstaff, AZ 85004, USA.ORCID 0000-0002-3439-4517
Rachel B BremDepartment of Plant and Microbial Biology, UC Berkeley, Berkeley, CA 94720-3102, USA.ORCID 0000-0002-8587-9434
Translational Genomics Research Institute · USUniversity of California, Berkeley · USUniversity of California, San Francisco · US

Funding

Virulence gene discovery in CoccidioidesU19AI166798 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Satya Dandekar · 2022 to 2026
$10.5M
Using Genetics and Genomics to Dissect Coccidioides SpherulationR21AI144855 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BREM, RACHEL BETH, SIL, ANITA · 2019 to 2020
$471k
NIAID NIH HHS R21 AI144855NIAID NIH HHS U19 AI166798NIH HHS AI144855
6 · The paper itself

Abstract

The human fungal pathogen

Indexed as

Coccidioidescopy number variationfungal pathogensgenome organizationvirulence

Identifiers

PMID36547568
PMCPMC9782707
OpenAlexW4309679279

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.