Evidence map›Paper›PMID 36547078›Full record

ArticleCurrent issues in molecular biology2022

Development and Validation of ScriptTaq COVID PCR: An In-House Multiplex rRT-PCR for Low-Cost Detection.

Dana Abdalghani AbuObead, Tasnim Khalid Alhomsi, Mahmoud Zhra, Bandar Alosaimi, Muaawia Hamza, Maaweya Awadalla, Osama Ezzeldin Abdelhadi, Joud Abdullah Alsharif, Liliane Okdah, Khaled AlKattan and 3 more

Open access · goldAbstract read
In one paragraph

Article in Current issues in molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Dana Abdalghani AbuObeadCollege of Medicine, Alfaisal University, Riyadh 11533, Saudi Arabia.ORCID 0000-0001-9152-7876
Tasnim Khalid AlhomsiCollege of Medicine, Alfaisal University, Riyadh 11533, Saudi Arabia.
Mahmoud ZhraCollege of Medicine, Alfaisal University, Riyadh 11533, Saudi Arabia.ORCID 0000-0001-5067-4984
Bandar AlosaimiResearch Center, King Fahad Medical City, Riyadh Second Health Cluster, Riyadh 11525, Saudi Arabia.ORCID 0000-0003-4719-2655
Muaawia HamzaResearch Center, King Fahad Medical City, Riyadh Second Health Cluster, Riyadh 11525, Saudi Arabia.ORCID 0000-0002-6710-2410
Maaweya AwadallaResearch Center, King Fahad Medical City, Riyadh Second Health Cluster, Riyadh 11525, Saudi Arabia.
Osama Ezzeldin AbdelhadiCollege of Medicine, Alfaisal University, Riyadh 11533, Saudi Arabia.
Joud Abdullah AlsharifCollege of Medicine, Alfaisal University, Riyadh 11533, Saudi Arabia.
Liliane OkdahInfectious Disease Research Department, King Abdullah International Medical Research Center, Riyadh 11481, Saudi Arabia.
Khaled AlKattanCollege of Medicine, Alfaisal University, Riyadh 11533, Saudi Arabia.ORCID 0000-0002-1372-9883
Saeed Al TurkiAnwa Medical Labs, King Saud University, Riyadh 11451, Saudi Arabia.
Hana M A FakhouryDepartment of Biochemistry and Molecular Medicine, College of Medicine, Alfaisal University, Riyadh 11533, Saudi Arabia.ORCID 0000-0001-9974-2108
Ahmad AljadaDepartment of Biochemistry and Molecular Medicine, College of Medicine, Alfaisal University, Riyadh 11533, Saudi Arabia.
Alfaisal University · SAKing Fahd Medical City · SAKing Abdullah International Medical Research Center · SAKing Saud University · SA

Funding

King Abdulaziz City for Science and Technology 5-20-01-023-0004
6 · The paper itself

Abstract

The COVID-19 pandemic necessitated an extensive testing for active SARS-CoV-2 infection. However, securing affordable diagnostic tests is a struggle for low-resource settings. We report herein the development and validation of an in-house multiplex real-time RT-PCR diagnostic test for the detection of active COVID-19 infection (ScriptTaq COVID PCR). Furthermore, we describe two methods for RNA extraction using either an in-house silica column or silica-coated magnetic beads to replace commercial RNA extraction kits. Different buffer formulations for silica column and silica-coated magnetic beads were tested and used for RNA isolation. Taq polymerase enzyme and thermostable reverse transcriptase enzyme were purified from bacterial clones. Primers/probes sequences published by the WHO and CDC were used for the qualitative detection of the

Indexed as

COVID-19in-house RNA isolationmagnetic beads RNA isolationmultiplex RT-PCRSARS-CoV-2silica-based RNA isolation

Identifiers

PMID36547078
PMCPMC9777119
OpenAlexW4311550060

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.