Evidence map›Paper›PMID 36544763›Full record

ArticleFrontiers in immunology2022

Deciphering a mitochondria-related signature to supervise prognosis and immunotherapy in hepatocellular carcinoma.

Yanlong Shi, Guo Huang, Fei Jiang, Jun Zhu, Qiyang Xu, Hanlu Fang, Sheng Lan, Ziyuan Pan, Haokun Jian, Li Li and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 8 institutions in 1 country.

Yanlong ShiHepatopancreatobiliary Center, The Second Affiliated Hospital of Nanjing Medical University, Nanjing, Jiangsu, China.
Guo HuangHengyang Medical School, University of South China, Hengyang, Hunan, China.
Fei JiangDepartment of General Surgery, Fuyang Hospital of Anhui Medical University, Fuyang, Anhui, China.
Jun ZhuDepartment of Oncology, Fuyang Hospital of Anhui Medical University, Fuyang, Anhui, China.
Qiyang XuDepartment of General Surgery, the Fifth People's Hospital of Fuyang City, Fuyang, Anhui, China.
Hanlu FangInstitute of Medical and Health Science, Hebei Medical University, Shijiazhuang, Hebei, China.
Sheng LanThe Second Clinical College of Guangzhou Medical University, Guangzhou, Guangdong, China.
Ziyuan PanHengyang Hospital affiliated of Hunan University of Chinese Medicine, Hengyang, Hunan, China.
Haokun JianSchool of Basic Medical Sciences, Xinxiang Medical University, Xinxiang, Henan, China.
Li LiDepartment of General Surgery, Fuyang Hospital of Anhui Medical University, Fuyang, Anhui, China.
Yewei ZhangHepatopancreatobiliary Center, The Second Affiliated Hospital of Nanjing Medical University, Nanjing, Jiangsu, China.
Anhui Medical University · CNSecond Affiliated Hospital of Nanjing Medical University · CNFuyang City People's Hospital · CNHebei Medical University · CNHengyang Academy of Agricultural Sciences · CNSecond Affiliated Hospital of Guangzhou Medical University · CNUniversity of South China · CNXinxiang Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Hepatocellular carcinoma (HCC) is a major public health problem in humans. The imbalance of mitochondrial function has been discovered to be closely related to the development of cancer recently. However, the role of mitochondrial-related genes in HCC remains unclear. Methods: The RNA-sequencing profiles and patient information of 365 samples were derived from the Cancer Genome Atlas (TCGA) dataset. The mitochondria-related prognostic model was established by univariate Cox regression analysis and LASSO Cox regression analysis. We further determined the differences in immunity and drug sensitivity between low- and high-risk groups. Validation data were obtained from the International Cancer Genome Consortium (ICGC) dataset of patients with HCC. The protein and mRNA expression of six mitochondria-related genes in tissues and cell lines was verified by immunohistochemistry and qRT-PCR. Results: The six mitochondria-related gene signature was constructed for better prognosis forecasting and immunity, based on which patients were divided into high-risk and low-risk groups. The ROC curve, nomogram, and calibration curve exhibited admirable clinical predictive performance of the model. The risk score was associated with clinicopathological characteristics and proved to be an independent prognostic factor in patients with HCC. The above results were verified in the ICGC validation cohort. Compared with normal tissues and cell lines, the protein and mRNA expression of six mitochondria-related genes was upregulated in HCC tissues and cell lines. Conclusion: The signature could be an independent factor that supervises the immunotherapy response of HCC patients and possess vital guidance value for clinical diagnosis and treatment.

Indexed as

Carcinoma, HepatocellularLiver NeoplasmsDNA, MitochondrialHumansImmunotherapyMitochondriaPrognosisRNA, MessengerDNA, MitochondrialRNA, Messengerconsensus clusteringdrug sensitivityhepatocellular carcinomaimmunotherapymitochondriatumor microenvironment

Identifiers

PMID36544763
PMCPMC9761315
OpenAlexW4311519690

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.