Evidence map›Paper›PMID 36544474›Full record

ArticleComputational and structural biotechnology journal2023

OrganelX web server for sub-peroxisomal and sub-mitochondrial protein localization and peroxisomal target signal detection.

Marco Anteghini, Asmaa Haja, Vitor A P Martins Dos Santos, Lambert Schomaker, Edoardo Saccenti

Abstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Protein subcellular localization prediction tools.Computational and structural biotechnology journal · 2024
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Marco AnteghiniLaboratory of Systems and Synthetic Biology, Wageningen University & Research, Wageningen, The Netherlands.
Asmaa HajaBernoulli Institute, University of Groningen, Groningen, The Netherlands.
Vitor A P Martins Dos SantosLifeGlimmer GmbH, Berlin, Germany.
Lambert SchomakerBernoulli Institute, University of Groningen, Groningen, The Netherlands.
Edoardo SaccentiLaboratory of Systems and Synthetic Biology, Wageningen University & Research, Wageningen, The Netherlands.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present the OrganelX e-Science Web Server that provides a user-friendly implementation of the In-Pero and In-Mito classifiers for sub-peroxisomal and sub-mitochondrial localization of peroxisomal and mitochondrial proteins and the Is-PTS1 algorithm for detecting and validating potential peroxisomal proteins carrying a PTS1 signal sequence. The OrganelX e-Science Web Server is available at https://organelx.hpc.rug.nl/fasta/.

Indexed as

Peroxisomal-targeting-signalPeroxisomeSub-cellular localizationSub-mithocondrial localizationSub-peroxisomal localization

Identifiers

PMID36544474
PMCPMC9747352

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.