Evidence map›Paper›PMID 36543879›Full record

ArticleLeukemia2023

Recurrent germline variant in ATM associated with familial myeloproliferative neoplasms.

Evan M Braunstein, Eddie Imada, Sergiu Pasca, Shiyu Wang, Hang Chen, Camille Alba, Dan N Hupalo, Matthew Wilkerson, Clifton L Dalgard, Jack Ghannam and 5 more

Abstract read
PubMed Publisher
In one paragraph

Article in Leukemia, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 8 citations in OpenAlex.

  1. Pooled it
  2. JAK2Leukemia · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Evaluation of theHaematologica · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 1 country.

Evan M BraunsteinDivision of Hematological Malignancies, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University, Baltimore, MD, USA.
Eddie ImadaDivision of Computational and Systems Pathology, Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.
Sergiu PascaDivision of Hematological Malignancies, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University, Baltimore, MD, USA.
Shiyu WangDivision of Hematological Malignancies, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University, Baltimore, MD, USA.
Hang ChenDivision of Hematology, Department of Medicine, Johns Hopkins Hospital, Baltimore, MD, USA.
Camille AlbaHenry Jackson Foundation for the Advancement of Military Medicine, Bethesda, MD, USA.
Dan N HupaloHenry Jackson Foundation for the Advancement of Military Medicine, Bethesda, MD, USA.
Matthew WilkersonDepartment of Anatomy Physiology & Genetics, Uniformed Services University of the Health Sciences, Bethesda, MD, USA.
Clifton L DalgardThe American Genome Center, Uniformed Services University of the Health Sciences, Bethesda, MD, USA.
Jack GhannamLaboratory of Myeloid Malignancies, National Heart, Lung and Blood Institute, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0003-0275-9099
Yujia LiuDepartment of Biochemistry and Molecular Biology, Biological Sciences Division, University of Chicago, Chicago, IL, USA.
Luigi MarchionniDivision of Computational and Systems Pathology, Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.ORCID 0000-0002-7336-8071
Alison MoliternoDivision of Hematology, Department of Medicine, Johns Hopkins Hospital, Baltimore, MD, USA.ORCID 0000-0002-8673-4317
Christopher S HouriganLaboratory of Myeloid Malignancies, National Heart, Lung and Blood Institute, National Institutes of Health, Bethesda, MD, USA.
Lukasz P GondekDivision of Hematological Malignancies, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University, Baltimore, MD, USA. lgondek1@jhmi.edu.ORCID 0000-0002-1551-3496
Johns Hopkins University · USCornell University · USHenry M. Jackson Foundation · USNational Institutes of Health · USUniformed Services University of the Health Sciences · USUniversity of Chicago · USJohns Hopkins Hospital · US

Funding

Detection, prevention and treatment of acute myeloid leukemia (AML) relapse.ZIAHL006163 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI HOURIGAN, CHRISTOPHER · 2013 to 2023
$21.0M
The Biological Consequences of Age-related Clonal HematopoiesisR01HL156144 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI GONDEK, LUKASZ PAWEL · 2021 to 2025
$2.0M
6 · The paper itself

Abstract

Genetic predisposition (familial risk) in the myeloproliferative neoplasms (MPNs) is more common than the risk observed in most other cancers, including breast, prostate, and colon. Up to 10% of MPNs are considered to be familial. Recent genome-wide association studies have identified genomic loci associated with an MPN diagnosis. However, the identification of variants with functional contributions to the development of MPN remains limited. In this study, we have included 630 MPN patients and whole genome sequencing was performed in 64 individuals with familial MPN to uncover recurrent germline predisposition variants. Both targeted and unbiased filtering of single nucleotide variants (SNVs) was performed, with a comparison to 218 individuals with MPN unselected for familial status. This approach identified an ATM L2307F SNV occurring in nearly 8% of individuals with familial MPN. Structural protein modeling of this variant suggested stabilization of inactive ATM dimer, and alteration of the endogenous ATM locus in a human myeloid cell line resulted in decreased phosphorylation of the downstream tumor suppressor CHEK2. These results implicate ATM, and the DNA-damage response pathway, in predisposition to MPN.

Indexed as

Myeloproliferative DisordersNeoplasmsAtaxia Telangiectasia Mutated ProteinsFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyGerm CellsGerm-Line MutationHumansMaleAtaxia Telangiectasia Mutated ProteinsATM protein, human

Identifiers

PMID36543879
OpenAlexW4312070900

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.