Evidence map›Paper›PMID 36543843›Full record

ArticleScientific reports2022

Dicentric chromosome assay using a deep learning-based automated system.

Soo Kyung Jeong, Su Jung Oh, Song-Hyun Kim, Seungsoo Jang, Yeong-Rok Kang, HyoJin Kim, Yong Uk Kye, Seong Hun Lee, Chang Geun Lee, Moon-Taek Park and 3 more

Abstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Soo Kyung JeongResearch Center, Dongnam Institute of Radiological & Medical Sciences (DIRAMS), 40 Jwadong-Gil, Jangan-Eup, Gijang-Gun, Busan, 46033, Republic of Korea.
Su Jung OhResearch Center, Dongnam Institute of Radiological & Medical Sciences (DIRAMS), 40 Jwadong-Gil, Jangan-Eup, Gijang-Gun, Busan, 46033, Republic of Korea.
Song-Hyun KimSierraBASE Co. Ltd., 77 Cheongam-Ro, Nam-Gu, Pohang, 37673, Republic of Korea.
Seungsoo JangDivision of Advanced Nuclear Engineering, POSTECH, 77 Cheongam-Ro, Nam-Gu, Pohang, 37673, Republic of Korea.
Yeong-Rok KangResearch Center, Dongnam Institute of Radiological & Medical Sciences (DIRAMS), 40 Jwadong-Gil, Jangan-Eup, Gijang-Gun, Busan, 46033, Republic of Korea.
HyoJin KimResearch Center, Dongnam Institute of Radiological & Medical Sciences (DIRAMS), 40 Jwadong-Gil, Jangan-Eup, Gijang-Gun, Busan, 46033, Republic of Korea.
Yong Uk KyeResearch Center, Dongnam Institute of Radiological & Medical Sciences (DIRAMS), 40 Jwadong-Gil, Jangan-Eup, Gijang-Gun, Busan, 46033, Republic of Korea.
Seong Hun LeeResearch Center, Dongnam Institute of Radiological & Medical Sciences (DIRAMS), 40 Jwadong-Gil, Jangan-Eup, Gijang-Gun, Busan, 46033, Republic of Korea.
Chang Geun LeeResearch Center, Dongnam Institute of Radiological & Medical Sciences (DIRAMS), 40 Jwadong-Gil, Jangan-Eup, Gijang-Gun, Busan, 46033, Republic of Korea.
Moon-Taek ParkResearch Center, Dongnam Institute of Radiological & Medical Sciences (DIRAMS), 40 Jwadong-Gil, Jangan-Eup, Gijang-Gun, Busan, 46033, Republic of Korea.
Joong Sun KimCollege of Veterinary Medicine and BK21 Plus Project Team, Chonnam National University, 77 Yongbong-Ro, Buk-Gu, Gwangju, 61186, Republic of Korea.
Min Ho JeongDepartment of Microbiology, Dong-A University College of Medicine, Daeshingongwon-Gil 32, Seo-Gu, Busan, 602-714, Republic of Korea. mhjeong@dau.ac.kr.
Wol Soon JoResearch Center, Dongnam Institute of Radiological & Medical Sciences (DIRAMS), 40 Jwadong-Gil, Jangan-Eup, Gijang-Gun, Busan, 46033, Republic of Korea. sailorjo@dirams.re.kr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The dicentric chromosome assay is the "gold standard" in biodosimetry for estimating radiation exposure. However, its large-scale deployment is limited owing to its time-consuming nature and requirement for expert reviewers. Therefore, a recently developed automated system was evaluated for the dicentric chromosome assay. A previously constructed deep learning-based automatic dose-estimation system (DLADES) was used to construct dose curves and calculate estimated doses. Blood samples from two donors were exposed to cobalt-60 gamma rays (0-4 Gy, 0.8 Gy/min). The DLADES efficiently identified monocentric and dicentric chromosomes but showed impaired recognition of complete cells with 46 chromosomes. We estimated the chromosome number of each "Accepted" sample in the DLADES and sorted similar-quality images by removing outliers using the 1.5IQR method. Eleven of the 12 data points followed Poisson distribution. Blind samples were prepared for each dose to verify the accuracy of the estimated dose generated by the curve. The estimated dose was calculated using Merkle's method. The actual dose for each sample was within the 95% confidence limits of the estimated dose. Sorting similar-quality images using chromosome numbers is crucial for the automated dicentric chromosome assay. We successfully constructed a dose-response curve and determined the estimated dose using the DLADES.

Indexed as

Deep LearningRadiometryChromosome AberrationsChromosomes, HumanDose-Response Relationship, RadiationGamma RaysHumans

Identifiers

PMID36543843
PMCPMC9772420

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.