Evidence map›Paper›PMID 36543798›Full record

ArticleScientific reports2022

Complete mitochondrial genome of Hygrobates turcicus Pešić, Esen & Dabert, 2017 (Acari, Hydrachnidia, Hygrobatoidea).

Andrzej Zawal, Lidia Skuza, Grzegorz Michoński, Aleksandra Bańkowska, Izabela Szućko-Kociuba, Romain Gastineau

Abstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Andrzej ZawalInstitute of Marine and Environmental Sciences, Center of Molecular Biology and Biotechnology, University of Szczecin, Waska 13, 71-415, Szczecin, Poland.ORCID 0000-0002-5838-6060
Lidia SkuzaInstitute of Biology, Center of Molecular Biology and Biotechnology, University of Szczecin, Waska 13, 71-415, Szczecin, Poland. lidia.skuza@usz.edu.pl.ORCID 0000-0002-6362-844X
Grzegorz MichońskiInstitute of Marine and Environmental Sciences, Center of Molecular Biology and Biotechnology, University of Szczecin, Waska 13, 71-415, Szczecin, Poland.ORCID 0000-0001-7668-0493
Aleksandra BańkowskaInstitute of Biology, Center of Molecular Biology and Biotechnology, University of Szczecin, Waska 13, 71-415, Szczecin, Poland.ORCID 0000-0003-1037-0550
Izabela Szućko-KociubaInstitute of Biology, Center of Molecular Biology and Biotechnology, University of Szczecin, Waska 13, 71-415, Szczecin, Poland.ORCID 0000-0002-2974-1908
Romain GastineauInstitute of Marine and Environmental Sciences, Center of Molecular Biology and Biotechnology, University of Szczecin, Waska 13, 71-415, Szczecin, Poland.ORCID 0000-0001-8661-5118

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of the study was sequencing of the mitogenome of Hygrobates turcicus Pešić, Esen & Dabert, 2017 to expand knowledge of the polymorphism and cryptic or pseudocryptic diversity within Hydrachnidia. The samples originated from Bulgaria, Vidima River near Debnewo, 42°56'41.4''N, 24°48'44.6''E, depth 0.4 m, stones on the bottom, water flow 0.71 m/s, temperature 10 °C, pH 8.53, oxygen 110%, conductivity 279 µS/cm, hardness 121 CaO mg/l; 11 males, 27 females, 2 deutonymphs 12.x.2019 leg. Zawal, Michoński & Bańkowska; one male and one female dissected and slides mounted. The study was carried out using the following methods: DNA extraction, sequencing, assembly and annotation, comparison with other populations of H. turcicus, and multigene phylogeny. As a result of the study, it was determined that the mitogenome is 15,006 bp long and encodes for 13 proteins, 2 rRNAs, and 22 tRNAs. The genome is colinear with those of H. longiporus and H. taniguchii, the difference in size originating from a non-coding region located between protein-coding genes ND4L and ND3. Five genes have alternative start-codon, and four display premature termination. The multigene phylogeny obtained using all mitochondrial protein-coding genes unambiguously associates H. turcicus with the cluster formed by H. longiporus and H. taniguchii.

Indexed as

AcariGenome, MitochondrialAnimalsCodon, InitiatorDNA, MitochondrialFemaleMaleMitochondriaPhylogenyRNA, RibosomalRNA, TransferSequence Analysis, DNACodon, InitiatorDNA, MitochondrialRNA, RibosomalRNA, Transfer

Identifiers

PMID36543798
PMCPMC9772306

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.