Evidence map›Paper›PMID 36543766›Full record

ArticleNature communications2022

Sourcing thermotolerant poly(ethylene terephthalate) hydrolase scaffolds from natural diversity.

Erika Erickson, Japheth E Gado, Luisana Avilán, Felicia Bratti, Richard K Brizendine, Paul A Cox, Raj Gill, Rosie Graham, Dong-Jin Kim, Gerhard König and 11 more

Abstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Predicting Functional Diversity Within Enzyme Families: A Practical Perspective.Chembiochem : a European journal of chemical biology · 2026
    Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Molecular Dynamics Insights into the Biodegradation of Synthetic Polymers byJournal of chemical information and modeling · 2026
    Article
  17. Article
  18. Article
  19. Article
  20. Review

20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Erika Erickson *Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA.ORCID 0000-0001-7806-9348
Japheth E Gado *Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA.
Luisana AvilánCentre for Enzyme Innovation, School of Biological Sciences, University of Portsmouth, Portsmouth, UK.
Felicia BrattiRenewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA.
Richard K BrizendineRenewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA.
Paul A CoxCentre for Enzyme Innovation, School of Biological Sciences, University of Portsmouth, Portsmouth, UK.
Raj GillCentre for Enzyme Innovation, School of Biological Sciences, University of Portsmouth, Portsmouth, UK.ORCID 0000-0001-7696-1244
Rosie GrahamCentre for Enzyme Innovation, School of Biological Sciences, University of Portsmouth, Portsmouth, UK.
Dong-Jin KimBOTTLE Consortium, Golden, CO, USA.
Gerhard KönigCentre for Enzyme Innovation, School of Biological Sciences, University of Portsmouth, Portsmouth, UK.ORCID 0000-0003-4898-2958
William E MichenerRenewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA.
Saroj PoudelDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.
Kelsey J RamirezRenewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA.ORCID 0000-0002-5114-742X
Thomas J ShakespeareCentre for Enzyme Innovation, School of Biological Sciences, University of Portsmouth, Portsmouth, UK.
Michael ZahnCentre for Enzyme Innovation, School of Biological Sciences, University of Portsmouth, Portsmouth, UK.
Eric S BoydDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.
Christina M PayneNational Science Foundation, Alexandria, VA, USA.
Jennifer L DuBoisBOTTLE Consortium, Golden, CO, USA.ORCID 0000-0001-5593-3391
Andrew R PickfordBOTTLE Consortium, Golden, CO, USA.ORCID 0000-0002-7237-0030
Gregg T BeckhamRenewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA. gregg.beckham@nrel.gov.ORCID 0000-0002-3480-212X
John E McGeehanBOTTLE Consortium, Golden, CO, USA. drjohnmcgeehan@gmail.com.ORCID 0000-0002-6750-1462

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Enzymatic deconstruction of poly(ethylene terephthalate) (PET) is under intense investigation, given the ability of hydrolase enzymes to depolymerize PET to its constituent monomers near the polymer glass transition temperature. To date, reported PET hydrolases have been sourced from a relatively narrow sequence space. Here, we identify additional PET-active biocatalysts from natural diversity by using bioinformatics and machine learning to mine 74 putative thermotolerant PET hydrolases. We successfully express, purify, and assay 51 enzymes from seven distinct phylogenetic groups; observing PET hydrolysis activity on amorphous PET film from 37 enzymes in reactions spanning pH from 4.5-9.0 and temperatures from 30-70 °C. We conduct PET hydrolysis time-course reactions with the best-performing enzymes, where we observe differences in substrate selectivity as function of PET morphology. We employed X-ray crystallography and AlphaFold to examine the enzyme architectures of all 74 candidates, revealing protein folds and accessory domains not previously associated with PET deconstruction. Overall, this study expands the number and diversity of thermotolerant scaffolds for enzymatic PET deconstruction.

Indexed as

HydrolasesPolyethylene TerephthalatesEthylenesHydrolysisPhthalic AcidsPhylogenyEthylenesHydrolasesPhthalic AcidsPolyethylene Terephthalatesterephthalic acid

Identifiers

PMID36543766
PMCPMC9772341

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.