Evidence map›Paper›PMID 36542818›Full record

ArticleJCO clinical cancer informatics2022

Identifying Nonpatient Authors of Patient Portal Secure Messages in Oncology: A Proof-of-Concept Demonstration of Natural Language Processing Methods.

Natalie C Benda, Christopher Rogers, Mohit Sharma, Wazim Narain, Lisa C Diamond, Jessica Ancker, Kenneth Seier, Peter D Stetson, Lina Sulieman, Misha Armstrong and 1 more

Erratum issuedAbstract read
In one paragraph

Article in JCO clinical cancer informatics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  5. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Natalie C BendaDepartment of Population Health Sciences, Weill Cornell Medicine, New York, NY.
Christopher RogersDepartment of Health Informatics, Memorial Sloan Kettering Cancer Center, New York, NY.
Mohit SharmaDepartment of Population Health Sciences, Weill Cornell Medicine, New York, NY.
Wazim NarainDepartment of Health Informatics, Memorial Sloan Kettering Cancer Center, New York, NY.
Lisa C DiamondDepartment of Population Health Sciences, Weill Cornell Medicine, New York, NY.ORCID 0000-0002-2175-6224
Jessica AnckerHospital Medicine Service, Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY.ORCID 0000-0002-3859-9130
Kenneth SeierDepartment of Epidemiology- Biostatistics, Memorial Sloan Kettering Cancer Center, New York, NY.
Peter D StetsonDepartment of Health Informatics, Memorial Sloan Kettering Cancer Center, New York, NY.ORCID 0000-0002-8984-1302
Lina SuliemanDepartment of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN.
Misha ArmstrongDepartment of Surgery, New York Presbyterian-Weill Cornell Medicine, New York, NY.
Yifan PengDepartment of Population Health Sciences, Weill Cornell Medicine, New York, NY.ORCID 0000-0001-9309-8331

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
A framework to enhance radiology structured report by invoking NLP and DL: Models and ApplicationsR00LM013001 · NLM · WEILL MEDICAL COLL OF CORNELL UNIV · PI PENG, YIFAN · 2020 to 2022
$710k
NCI NIH HHS P30 CA008748NLM NIH HHS R00 LM013001
6 · The paper itself

Abstract

purposePatient portal secure messages are not always authored by the patient account holder. Understanding who authored the message is particularly important in an oncology setting where symptom reporting is crucial to patient treatment. Natural language processing has the potential to detect messages not authored by the patient automatically.

methodsPatient portal secure messages from the Memorial Sloan Kettering Cancer Center were retrieved and manually annotated as a predicted unregistered proxy (ie, not written by the patient) or a presumed patient. After randomly splitting the annotated messages into training and test sets in a 70:30 ratio, a bag-of-words approach was used to extract features and then a Least Absolute Shrinkage and Selection Operator (LASSO) model was trained and used for classification.

resultsPortal secure messages (n = 2,000) were randomly selected from unique patient accounts and manually annotated. We excluded 335 messages from the data set as the annotators could not determine if they were written by a patient or proxy. Using the remaining 1,665 messages, a LASSO model was developed that achieved an area under the curve of 0.932 and an area under the precision recall curve of 0.748. The sensitivity and specificity related to classifying true-positive cases (predicted unregistered proxy-authored messages) and true negatives (presumed patient-authored messages) were 0.681 and 0.960, respectively.

conclusionOur work demonstrates the feasibility of using unstructured, heterogenous patient portal secure messages to determine portal secure message authorship. Identifying patient authorship in real time can improve patient portal account security and can be used to improve the quality of the information extracted from the patient portal, such as patient-reported outcomes.

Indexed as

Natural Language ProcessingPatient PortalsHumansProof of Concept Study

Identifiers

PMID36542818
PMCPMC10476725

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.