Evidence map›Paper›PMID 36539899›Full record

ArticleEuropean journal of medical research2022

The value of Xpert MTB/RIF assay of urine samples in the early diagnosis of smear-negative urinary tuberculosis.

Yachun Wang, Jiao Tan, Lei Lei, Yingying Yuan, Wenbo Li, Yue Zhao, Yali Wang, Xiaodong Niu, Zheng Li, Lukuan Wei and 5 more

Open access · goldAbstract read
In one paragraph

Article in European journal of medical research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Yachun WangMedical Laboratory, Henan Provincial Chest Hospital, Zhengzhou University, Zhengzhou, 450003, China.
Jiao TanMedical Laboratory, Henan Provincial Chest Hospital, Zhengzhou University, Zhengzhou, 450003, China.
Lei LeiHenan Provincial Key Laboratory of Tuberculosis Diagnostic Medicine, Zhengzhou, 450003, China.
Yingying YuanMedical Laboratory, Henan Provincial Chest Hospital, Zhengzhou University, Zhengzhou, 450003, China.
Wenbo LiMedical Laboratory, Henan Provincial Chest Hospital, Zhengzhou University, Zhengzhou, 450003, China.
Yue ZhaoMedical Laboratory, Henan Provincial Chest Hospital, Zhengzhou University, Zhengzhou, 450003, China.
Yali WangMedical Laboratory, Henan Provincial Chest Hospital, Zhengzhou University, Zhengzhou, 450003, China.
Xiaodong NiuMedical Laboratory, Henan Provincial Chest Hospital, Zhengzhou University, Zhengzhou, 450003, China.
Zheng LiMedical Laboratory, Henan Provincial Chest Hospital, Zhengzhou University, Zhengzhou, 450003, China.
Lukuan WeiMedical Laboratory, Henan Provincial Chest Hospital, Zhengzhou University, Zhengzhou, 450003, China.
Yungang HanMedical Laboratory, Henan Provincial Chest Hospital, Zhengzhou University, Zhengzhou, 450003, China.
Meijing ChengMedical Laboratory, Henan Provincial Chest Hospital, Zhengzhou University, Zhengzhou, 450003, China.
Xu GuoMedical Laboratory, Henan Provincial Chest Hospital, Zhengzhou University, Zhengzhou, 450003, China.
Xue HanMedical Laboratory, Henan Provincial Chest Hospital, Zhengzhou University, Zhengzhou, 450003, China.
Wei WangMedical Laboratory, Henan Provincial Chest Hospital, Zhengzhou University, Zhengzhou, 450003, China. jyk2785@163.com.
Zhengzhou University · CNHenan Provincial Chest Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAccording to reports, between 30 and 40 percent of extrapulmonary tuberculosis (EPTB) cases are caused by urinary tract tuberculosis (UTB). It is critical to identify UTB quickly since it frequently precedes delayed medical attention, which can have detrimental effects. This study examined the use of Xpert MTB/RIF, a PCR test that can detect MTB as well as resistance to an important drug, rifampicin (RIF), in UTB particularly, for the early identification of UTB.

methods180 participants with clinically presumptive UTB whose urine samples were chosen for urine sediment smear, culture, Xpert MTB/RIF, and TB-DNA testing at Henan Chest Hospital between January 2019 and July 2022. Evaluation of test performance using Composite Reference Standards (CRSs). We studied and compared the positivity rate for various tests using the t-test. The effectiveness of smear, culture, Xpert MTB/RIF, and TB-DNA was assessed using McNemar test.

resultsIn this subject, a total of 108 participants were diagnosed with UTB, and the positivity rate was 67.1%. Compared with CRS, the positivity rate of Xpert MTB/RIF, smear, culture, and TB-DNA was 29.69% (19/64, P < 0.001), 7.56% (9/119, P < 0.1), 12.12% (4/33, P > 0.05), and 18.75% (6/32, P < 0.1), respectively. The sensitivity of Xpert MTB/RIF assay was significantly better than that of smear and culture tests (78.9% vs. 77.8%, P < 0.05; 78.9% vs. 75%, P < 0.05). Under CRS, the positivity rate for Xpert, culture, and TB-DNA was 31.6% (6/19, P < 0.1), 6.2% (1/16, P > 0.05), and 26.7% (4/15, P > 0.05) for TB-DNA, respectively, compared to smear negative. Xpert MTB/RIF assay specificity was significant for culture and TB-DNA (53.6% vs. 25%, P < 0.01; 53.6% vs. 38.9%, P < 0.05), and Xpert MTB/RIF assay FPV was significant for culture and TB-DNA (53.6% vs. 0%, P < 0.001; 53.6% vs. 0%, P < 0.001).

conclusionXpert MTB/RIF outperforms smear, cultures, and TB-DNA in detecting UTB, plus Xpert MTB/RIF is better suited for early diagnosis in smear-negative UTB.

Indexed as

Mycobacterium tuberculosisTuberculosis, PulmonaryDrug Resistance, BacterialEarly DiagnosisHumansRifampinSensitivity and SpecificitySputumRifampinCultureSmear-negativeTB-DNAUrinary tract tuberculosisXpert MTB/RIF assay

Identifiers

PMID36539899
PMCPMC9764486
OpenAlexW4312113294

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.