Evidence map›Paper›PMID 36539757›Full record

ArticleRetrovirology2022

An endogenous lentivirus in the germline of a rodent.

Roziah Kambol, Anna Gatseva, Robert J Gifford

Open access · goldAbstract read
In one paragraph

Article in Retrovirology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Roziah KambolSchool of Biological Sciences, Faculty of Applied Sciences, University Teknologi MARA, 40450, Shah Alam, Selangor, Malaysia.
Anna GatsevaMRC-University of Glasgow Centre for Virus Research, 464 Bearsden Rd, Bearsden, G61 1QH, Glasgow, UK.
Robert J GiffordMRC-University of Glasgow Centre for Virus Research, 464 Bearsden Rd, Bearsden, G61 1QH, Glasgow, UK. robert.gifford@glasgow.ac.uk.
MRC University of Glasgow Centre for Virus Research · GBUniversiti Teknologi MARA · MY

Funding

Medical Research Council MC_UU_12014/12
6 · The paper itself

Abstract

Lentiviruses (genus Lentivirus) are complex retroviruses that infect a broad range of mammals, including humans. Unlike many other retrovirus genera, lentiviruses have only rarely been incorporated into the mammalian germline. However, a small number of endogenous retrovirus (ERV) lineages have been identified, and these rare genomic "fossils" can provide crucial insights into the long-term history of lentivirus evolution. Here, we describe a previously unreported endogenous lentivirus lineage in the genome of the South African springhare (Pedetes capensis), demonstrating that the host range of lentiviruses has historically extended to rodents (order Rodentia). Furthermore, through comparative and phylogenetic analysis of lentivirus and ERV genomes, considering the biogeographic and ecological characteristics of host species, we reveal broader insights into the long-term evolutionary history of the genus.

Indexed as

Endogenous RetrovirusesLentivirusAnimalsEvolution, MolecularHumansMammalsPhylogenyRodentiaEcologyEndogenous retrovirusEvolutionLentivirusPaleovirologyRetrovirus

Identifiers

PMID36539757
PMCPMC9768972
OpenAlexW4312114417

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.