Evidence map›Paper›PMID 36538006›Full record

ArticleMolecular genetics & genomic medicine2023

Compound heterozygous splicing variants in KIAA0586 cause fetal short-rib thoracic dysplasia and cerebellar malformation: Use of exome sequencing in prenatal diagnosis.

Qianying Zhao, Bocheng Xu, Qinqin Xiang, Yu Tan, Hanbing Xie, Qianqian Gao, Lingyi Wen, He Wang, Mei Yang, Shanling Liu

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 31% of its field
1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Qianying ZhaoDepartment of Obstetrics & Gynecology, West China Second University Hospital, Sichuan University, Chengdu, China.ORCID 0000-0003-3026-4827
Bocheng XuDepartment of Obstetrics & Gynecology, West China Second University Hospital, Sichuan University, Chengdu, China.
Qinqin XiangDepartment of Obstetrics & Gynecology, West China Second University Hospital, Sichuan University, Chengdu, China.
Yu TanDepartment of Obstetrics & Gynecology, West China Second University Hospital, Sichuan University, Chengdu, China.
Hanbing XieDepartment of Obstetrics & Gynecology, West China Second University Hospital, Sichuan University, Chengdu, China.
Qianqian GaoKey Laboratory of Birth Defects and Related Diseases of Women and Children (Sichuan University), Ministry of Education, Chengdu, China.
Lingyi WenKey Laboratory of Birth Defects and Related Diseases of Women and Children (Sichuan University), Ministry of Education, Chengdu, China.
He WangDepartment of Obstetrics & Gynecology, West China Second University Hospital, Sichuan University, Chengdu, China.
Mei YangDepartment of Obstetrics & Gynecology, West China Second University Hospital, Sichuan University, Chengdu, China.ORCID 0000-0002-6200-5865
Shanling LiuDepartment of Obstetrics & Gynecology, West China Second University Hospital, Sichuan University, Chengdu, China.
Sichuan University · CN

Funding

National Key Research and Development Program of China 2021YFC1005303Program of Science and Technology Department of Sichuan Province 2021YFS0078
6 · The paper itself

Abstract

backgroundShort-rib thoracic dysplasia (SRTD) and Joubert syndrome (JS) are rare genetic ciliopathies, and individuals with either syndrome can manifest cerebellar malformation and variable developmental delays. However, neither of these conditions is easily diagnosed during pregnancy due to a limited fetal phenotype. Here, we investigated a fetus that was initially observed to have short limbs and polydactyly and discovered a compound heterozygous pathogenesis through exome sequencing (ES).

methodsSimultaneous trio-ES and chromosome microarray analysis was provided for the fetus. The presence and effects of these variants on splicing were further validated at the DNA and RNA levels.

resultsOnly short limbs and post-axial polydactyly of the fetus were detected during the second trimester. Two variants (c.3940+1G>A and c.3303G>A), affecting splicing of KIAA0586, were identified from amniocytes through ES and validated by Sanger sequencing. More intensive fetal monitoring was applied, and the fetus was also found to have deformed cerebellar malformation and a constricted thoracic cage.

conclusionsHerein, we report the genetic pathogenesis of SRTD and/or JS associated with KIAA0586 in a fetus. The novel splicing variants observed expand the spectrum of KIAA0586 in SRTD and/or JS. Based on the genetic data and the distinct corresponding phenotypes discovered by imaging examination, a comprehensive diagnosis was made during pregnancy and more valuable prognostic information was provided for the parents.

Indexed as

OsteochondrodysplasiasPolydactylyAbnormalities, MultipleCell Cycle ProteinsCerebellumExome SequencingEye AbnormalitiesFemaleFetusHeterozygoteHumansKidney Diseases, CysticPregnancyPrenatal DiagnosisRetinaRibsCell Cycle ProteinsKIAA0586 protein, humanexome sequencingJoubert syndromeKIAA0586prenatal diagnosisshort-rib thoracic dysplasiasplicing variants

Identifiers

PMID36538006
PMCPMC10009908
OpenAlexW4312019243

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