Evidence map›Paper›PMID 36536133›Full record

ArticleNature metabolism2022

Liver RBFOX2 regulates cholesterol homeostasis via Scarb1 alternative splicing in mice.

Helen A B Paterson, Sijia Yu, Natalia Artigas, Miguel A Prado, Nejc Haberman, Yi-Fang Wang, Andrew M Jobbins, Elena Pahita, Joao Mokochinski, Zoe Hall and 12 more

Open access · hybridAbstract read
In one paragraph

Article in Nature metabolism, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
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  7. Science advances · 2025
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  20. Lipotoxicity as a therapeutic target in obesity and diabetic cardiomyopathy.Journal of pharmacy & pharmaceutical sciences : a publication of the Canadian Society for Pharmaceutical Sciences, Societe canadienne des sciences pharmaceutiques · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 5 institutions in 4 countries.

Helen A B Paterson *MRC London Institute of Medical Sciences, London, UK.
Sijia Yu *MRC London Institute of Medical Sciences, London, UK.ORCID http://orcid.org/0000-0002-3937-6676
Natalia ArtigasMRC London Institute of Medical Sciences, London, UK.ORCID http://orcid.org/0000-0003-3290-2052
Miguel A PradoDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-4914-1619
Nejc HabermanMRC London Institute of Medical Sciences, London, UK.ORCID http://orcid.org/0000-0001-9247-4139
Yi-Fang WangMRC London Institute of Medical Sciences, London, UK.
Andrew M JobbinsMRC London Institute of Medical Sciences, London, UK.
Elena PahitaMRC London Institute of Medical Sciences, London, UK.
Joao MokochinskiMRC London Institute of Medical Sciences, London, UK.ORCID http://orcid.org/0000-0002-9364-0386
Zoe HallDivision of Systems Medicine, Department of Metabolism, Digestion and Reproduction, Imperial College London, Hammersmith Hospital Campus, London, UK.ORCID http://orcid.org/0000-0002-1434-8329
Maryse GuerinSorbonne Université, Inserm, Institute of Cardiometabolism and Nutrition (ICAN), UMR_S1166, Paris, France.
Joao A PauloDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-4291-413X
Soon Seng NgDivision of Systems Medicine, Department of Metabolism, Digestion and Reproduction, Imperial College London, Hammersmith Hospital Campus, London, UK.
Francesc VillarroyaBiochemistry and Molecular Biomedicine Department, Institute of Biomedicine, University of Barcelona & Research Institute Sant Joan de Déu, Barcelona, Spain.ORCID http://orcid.org/0000-0003-1266-9142
Sheikh Tamir RashidDivision of Systems Medicine, Department of Metabolism, Digestion and Reproduction, Imperial College London, Hammersmith Hospital Campus, London, UK.ORCID http://orcid.org/0000-0001-6779-2506
Wilfried Le GoffSorbonne Université, Inserm, Institute of Cardiometabolism and Nutrition (ICAN), UMR_S1166, Paris, France.ORCID http://orcid.org/0000-0002-7611-9644
Boris LenhardMRC London Institute of Medical Sciences, London, UK.
Inês CebolaSection of Genetics and Genomics, Department of Metabolism, Digestion and Reproduction, Imperial College London, Hammersmith Hospital Campus, London, UK.ORCID http://orcid.org/0000-0003-3528-4982
Daniel FinleyDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0003-2076-5863
Steven P GygiDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0001-7626-0034
Christopher R SibleyInstitute of Quantitative Biology, Biochemistry and Biotechnology. School of Biological Sciences, University of Edinburgh, Edinburgh, UK.
Santiago VerniaMRC London Institute of Medical Sciences, London, UK. santiago.vernia@lms.mrc.ac.uk.ORCID http://orcid.org/0000-0001-6728-5555
Hammersmith Hospital · GBHarvard University · USInserm · FRInstituto de Salud Carlos III · ESUniversity of Edinburgh · GB

Funding

New Sample Multiplexing Technologies to Identify Chemical Probes and Illuminate Ubiquitin BiologyR01GM067945 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI GYGI, STEVEN P · 2003 to 2024
$10.5M
UBIQUITIN-PROTEIN CONJUGATES AND FUSIONSR01GM043601 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI FINLEY, DANIEL J · 1990 to 2020
$4.3M
Advancing Multiplexed Isobaric Tag-based Strategies for Proteome ProfilingR01GM132129 · NIGMS · HARVARD MEDICAL SCHOOL · PI PAULO, JOAO A · 2019 to 2023
$1.7M
Department of Health IS-BRC-1215-20013Medical Research Council MC_UP_1102/1Medical Research Council MC_UP_1102/18Medical Research Council MR/W019132/1NIGMS NIH HHS R01 GM043601NIGMS NIH HHS R01 GM067945NIGMS NIH HHS R01 GM132129Wellcome Trust 215454Wellcome Trust 215454/Z/19/Z
6 · The paper itself

Abstract

RNA alternative splicing (AS) expands the regulatory potential of eukaryotic genomes. The mechanisms regulating liver-specific AS profiles and their contribution to liver function are poorly understood. Here, we identify a key role for the splicing factor RNA-binding Fox protein 2 (RBFOX2) in maintaining cholesterol homeostasis in a lipogenic environment in the liver. Using enhanced individual-nucleotide-resolution ultra-violet cross-linking and immunoprecipitation, we identify physiologically relevant targets of RBFOX2 in mouse liver, including the scavenger receptor class B type I (Scarb1). RBFOX2 function is decreased in the liver in diet-induced obesity, causing a Scarb1 isoform switch and alteration of hepatocyte lipid homeostasis. Our findings demonstrate that specific AS programmes actively maintain liver physiology, and underlie the lipotoxic effects of obesogenic diets when dysregulated. Splice-switching oligonucleotides targeting this network alleviate obesity-induced inflammation in the liver and promote an anti-atherogenic lipoprotein profile in the blood, underscoring the potential of isoform-specific RNA therapeutics for treating metabolism-associated diseases.

Indexed as

Alternative SplicingRNA-Binding ProteinsAnimalsCholesterolHomeostasisLiverMiceProtein IsoformsRNARNA Splicing FactorsScavenger Receptors, Class BCholesterolProtein IsoformsRbfox2 protein, mouseRNARNA-Binding ProteinsRNA Splicing FactorsScarb1 protein, mouseScavenger Receptors, Class B

Identifiers

PMID36536133
PMCPMC9771820
OpenAlexW4313236650

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.