Evidence map›Paper›PMID 36533928›Full record

ArticleApplied and environmental microbiology2023

Identification of Subunits for Novel Universal Vaccines against Three Predominant Serogroups and the Emerging O145 among Avian Pathogenic Escherichia coli by Pan-RV Pipeline.

Zhuohao Wang, Sixiang Xu, Xiangkuan Zheng, Xiaofeng Zheng, Meihan Liu, Genglin Guo, Yanfei Yu, Xiangan Han, Yuqing Liu, Kaicheng Wang and 1 more

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Avian PathogenicAntibiotics (Basel, Switzerland) · 2024
    Review
  3. Pathogenicity and identification of host adaptation genes of the avian pathogenicFrontiers in cellular and infection microbiology · 2024
    Article
  4. Evaluation of Two Recombinant Protein-Based Vaccine Regimens againstAnimals : an open access journal from MDPI · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Zhuohao WangCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, China.
Sixiang XuCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, China.
Xiangkuan ZhengCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, China.
Xiaofeng ZhengCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, China.
Meihan LiuCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, China.
Genglin GuoCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, China.
Yanfei YuKey Laboratory of Veterinary Biological Engineering and Technology, Ministry of Agriculture, Institute of Veterinary Medicine, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Xiangan HanShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences (CAAS), Shanghai, China.
Yuqing LiuInstitute of Animal Science and Veterinary Medicine, Shandong Academy of Agricultural Sciences, Jinan, Shandong, China.
Kaicheng WangChina Animal Health and Epidemiology Center, Qingdao, Shandong, China.
Wei ZhangCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, China.ORCID 0000-0002-3575-6225
Nanjing Agricultural University · CNChina Animal Health and Epidemiology Center · CNJiangsu Academy of Agricultural Sciences · CNShandong Academy of Agricultural Sciences · CNShanghai Veterinary Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Avian pathogenic Escherichia coli, a causative agent of avian colibacillosis, has been causing serious economic losses in the poultry industry. The increase in multidrug-resistant isolates and the complexity of the serotypes of this pathogen, especially the recently reported emergence of a newly predominant serogroup of O145, make the control of this disease difficult. To address this challenge, a high-throughput screening approach, called Pan-RV (Reverse vaccinology based on pangenome analysis), is proposed to search for universal protective antigens against the three traditional serogroups and the newly emerged O145. Using this approach, a total of 61 proteins regarded as probable antigens against the four important serogroups were screened from the core genome of 127 Avian pathogenic Escherichia coli (APEC) genomes, and six were verified by Western blots using antisera. Overall, our research will provide a foundation for the development of an APEC subunit vaccine against avian colibacillosis. Given the exponential growth of whole-genome sequencing (WGS) data, our Pan-RV pipeline will make screening of bacterial vaccine candidates inexpensive, rapid, and efficient.

Indexed as

Escherichia coli InfectionsEscherichia coli VaccinesPoultry DiseasesAnimalsBacterial VaccinesChickensEscherichia coliPoultrySerogroupBacterial VaccinesEscherichia coli VaccinesAvian pathogenic Escherichia colimultiple serotypesO145pangenome analysisreverse vaccinologyvaccine subunits

Identifiers

PMID36533928
PMCPMC9888223
OpenAlexW4311930481

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.