Evidence map›Paper›PMID 36533711›Full record

ArticleThe plant genome2023

Brown midrib mutant and genome-wide association analysis uncover lignin genes for disease resistance in maize.

Judith M Kolkman, Danilo E Moreta, Ace Repka, Peter Bradbury, Rebecca J Nelson

Open access · goldAbstract read
In one paragraph

Article in The plant genome, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. From Defense Executor to Engineering Target: Harnessing Lignin for Crop Resistance.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Genome-wide identification of theFrontiers in plant science · 2024
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Judith M KolkmanSchool of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell Univ., Ithaca, NY, 14853, USA.ORCID 0000-0001-7388-7245
Danilo E MoretaSchool of Integrative Plant Science, Plant Breeding and Genetics Section, Cornell Univ., Ithaca, NY, 14853, USA.ORCID 0000-0001-6866-9200
Ace RepkaSchool of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell Univ., Ithaca, NY, 14853, USA.ORCID 0000-0002-9522-5610
Peter BradburyUSDA ARS, Ithaca, NY, 14853, USA.ORCID 0000-0003-3825-8480
Rebecca J NelsonSchool of Integrative Plant Science, Plant Pathology and Plant-Microbe Biology Section, Cornell Univ., Ithaca, NY, 14853, USA.ORCID 0000-0002-9026-7803
Cornell University · USIthaca College · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Brown midrib (BMR) maize (Zea mays L.) harbors mutations that result in lower lignin levels and higher feed digestibility, making it a desirable silage market class for ruminant nutrition. Northern leaf blight (NLB) epidemics in upstate New York highlighted the disease susceptibility of commercially grown BMR maize hybrids. We found the bm1, bm2, bm3, and bm4 mutants in a W64A genetic background to be more susceptible to foliar fungal (NLB, gray leaf spot [GLS], and anthracnose leaf blight [ALB]) and bacterial (Stewart's wilt) diseases. The bm1, bm2, and bm3 mutants showed enhanced susceptibility to anthracnose stalk rot (ASR), and the bm1 and bm3 mutants were more susceptible to Gibberella ear rot (GER). Colocalization of quantitative trait loci (QTL) and correlations between stalk strength and disease traits in recombinant inbred line families suggest possible pleiotropies. The role of lignin in plant defense was explored using high-resolution, genome-wide association analysis for resistance to NLB in the Goodman diversity panel. Association analysis identified 100 single and clustered single-nucleotide polymorphism (SNP) associations for resistance to NLB but did not implicate natural functional variation at bm1-bm5. Strong associations implicated a suite of diverse candidate genes including lignin-related genes such as a β-glucosidase gene cluster, hct11, knox1, knox2, zim36, lbd35, CASP-like protein 8, and xat3. The candidate genes are targets for breeding quantitative resistance to NLB in maize for use in silage and nonsilage purposes.

Indexed as

Disease ResistanceZea maysGenome-Wide Association StudyLigninPlant BreedingPlant ProteinsLigninPlant Proteins

Identifiers

PMID36533711
PMCPMC12807256
OpenAlexW4312194838

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.