Evidence map›Paper›PMID 36532474›Full record

ArticleFrontiers in microbiology2022

Whole-genome analysis revealed the growth-promoting mechanism of endophytic bacterial strain Q2H1 in potato plants.

Yuhu Wang, Qianqian Zhao, Zhenqi Sun, Yahui Li, Hongtao He, Yuanyu Zhang, Xiangdong Yang, Dong Wang, Baozhu Dong, Hongyou Zhou and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
6.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Yuhu WangCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot, China.
Qianqian ZhaoInstitute of Agro-Food Technology, Jilin Academy of Agricultural Sciences, Changchun, China.
Zhenqi SunCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot, China.
Yahui LiCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot, China.
Hongtao HeCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot, China.
Yuanyu ZhangJilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, China.
Xiangdong YangJilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, China.
Dong WangCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot, China.
Baozhu DongCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot, China.
Hongyou ZhouCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot, China.
Mingmin ZhaoCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot, China.
Hongli ZhengCollege of Horticulture and Plant Protection, Inner Mongolia Agricultural University, Hohhot, China.
Inner Mongolia Agricultural University · CNJilin Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Endophytes are non-pathogenic inhabitants of healthy plant tissues and have been found to promote plant growth and health. The endophytic bacterial strain Q2H1 was isolated from the roots of the potato and was identified to exhibit growth-promoting effects in potato plants. Methods: Whole-genome sequencing was performed to reveal the mechanism underlying its growth-promoting effect. The obtained sequencing data of approximately 5.65 MB encompassed 5,533 coding sequences. Of note, nine secondary metabolite gene clusters, including siderophore gene clusters, closely associated with plant growth promotion (PGP) were predicted by antiSMASH software. Comparative genomic analysis revealed that Q2H1 belongs to the genus Results: It is revealed that genes in the Q2H1 genome associated with nitrogen fixation belonged to three groups, namely, nitrogen fixation ( Conclusion: In summary, these findings implied that identifying strain-specific genes for their metabolic pathways in bacterial endophytes may reveal a variety of significant functions of plant growth-promoting mechanisms.

Indexed as

bacterial endophytesplant growth-promotingpotatoQ2H1whole-genome sequencing

Identifiers

PMID36532474
PMCPMC9751815
OpenAlexW4311065046

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.