Evidence map›Paper›PMID 36531584›Full record

ArticleOphthalmology science2022

Primary Open-Angle Glaucoma Diagnosis from Optic Disc Photographs Using a Siamese Network.

Mingquan Lin, Lei Liu, Mae Gordon, Michael Kass, Fei Wang, Sarah H Van Tassel, Yifan Peng

Open access · goldAbstract read
In one paragraph

Article in Ophthalmology science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Evaluate underdiagnosis and overdiagnosis bias of deep learning model on primary open-angle glaucoma diagnosis in under-served populations.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Mingquan LinDepartment of Population Health Sciences, Weill Cornell Medicine, New York, New York.
Lei LiuInstitute for Public Health, Washington University School of Medicine, St. Louis, Missouri.
Mae GordonDepartment of Ophthalmology and Visual Sciences, Washington University School of Medicine, St. Louis, Missouri.
Michael KassDepartment of Ophthalmology and Visual Sciences, Washington University School of Medicine, St. Louis, Missouri.
Fei WangDepartment of Population Health Sciences, Weill Cornell Medicine, New York, New York.
Sarah H Van TasselDepartment of Ophthalmology, Weill Cornell Medicine, New York, New York.
Yifan PengDepartment of Population Health Sciences, Weill Cornell Medicine, New York, New York.
Cornell University · USWashington University in St. Louis · US

Funding

WASHINGTON UNIVERSITY CENTER VISION RESEARCHP30EY002687 · NEI · WASHINGTON UNIVERSITY · PI Philip Raymond Williams · 1985 to 2026
$18.4M
OCULAR HYPERTENSION TREATMENT STUDY (OHTS)U10EY009307 · NEI · WASHINGTON UNIVERSITY · PI KASS, MICHAEL A · 1992 to 2009
$14.8M
OHTS DATA COORDINATIONU10EY009341 · NEI · WASHINGTON UNIVERSITY · PI GORDON, MAE O · 1992 to 2009
$12.3M
A framework to enhance radiology structured report by invoking NLP and DL: Models and ApplicationsR00LM013001 · NLM · WEILL MEDICAL COLL OF CORNELL UNIV · PI PENG, YIFAN · 2020 to 2022
$710k
NEI NIH HHS P30 EY002687NEI NIH HHS U10 EY009307NEI NIH HHS U10 EY009341NLM NIH HHS R00 LM013001
6 · The paper itself

Abstract

Purpose: Primary open-angle glaucoma (POAG) is one of the leading causes of irreversible blindness in the United States and worldwide. Although deep learning methods have been proposed to diagnose POAG, these methods all used a single image as input. Contrastingly, glaucoma specialists typically compare the follow-up image with the baseline image to diagnose incident glaucoma. To simulate this process, we proposed a Siamese neural network, POAGNet, to detect POAG from optic disc photographs. Design: The POAGNet, an algorithm for glaucoma diagnosis, is developed using optic disc photographs. Participants: The POAGNet was trained and evaluated on 2 data sets: (1) 37 339 optic disc photographs from 1636 Ocular Hypertension Treatment Study (OHTS) participants and (2) 3684 optic disc photographs from the Sequential fundus Images for Glaucoma (SIG) data set. Gold standard labels were obtained using reading center grades. Methods: We proposed a Siamese network model, POAGNet, to simulate the clinical process of identifying POAG from optic disc photographs. The POAGNet consists of 2 side outputs for deep supervision and uses convolution to measure the similarity between 2 networks. Main Outcome Measures: The main outcome measures are the area under the receiver operating characteristic curve, accuracy, sensitivity, and specificity. Results: In POAG diagnosis, extensive experiments show that POAGNet performed better than the best state-of-the-art model on the OHTS test set (area under the curve [AUC] 0.9587 versus 0.8750). It also outperformed the baseline models on the SIG test set (AUC 0.7518 versus 0.6434). To assess the transferability of POAGNet, we also validated the impact of cross-data set variability on our model. The model trained on OHTS achieved an AUC of 0.7490 on SIG, comparable to the previous model trained on the same data set. When using the combination of SIG and OHTS for training, our model achieved superior AUC to the single-data model (AUC 0.8165 versus 0.7518). These demonstrate the relative generalizability of POAGNet. Conclusions: By simulating the clinical grading process, POAGNet demonstrated high accuracy in POAG diagnosis. These results highlight the potential of deep learning to assist and enhance clinical POAG diagnosis. The POAGNet is publicly available on https://github.com/bionlplab/poagnet.

Indexed as

AUC, area under the curveDeep learningFundus photographsOHTS, Ocular Hypertension Treatment StudyPOAG, primary open-angle glaucomaPrimary open-angle glaucoma (POAG)Siamese networkSIG, sequential fundus Images for GlaucomaVF, visual field

Identifiers

PMID36531584
PMCPMC9754976
OpenAlexW4291177921

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.