Evidence map›Paper›PMID 36531402›Full record

ArticleFrontiers in plant science2022

Experimental rice seed aging under elevated oxygen pressure: Methodology and mechanism.

Manjunath Prasad C T, Jan Kodde, Gerco C Angenent, Ric C H de Vos, Carmen Diez-Simon, Roland Mumm, Fiona R Hay, Sasiwimon Siricharoen, Devendra K Yadava, Steven P C Groot

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

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  5. Genome-wide association studies identifiedFrontiers in plant science · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Manjunath Prasad C TBioscience, Wageningen Plant Research, Wageningen University and Research, Wageningen, Netherlands.
Jan KoddeBioscience, Wageningen Plant Research, Wageningen University and Research, Wageningen, Netherlands.
Gerco C AngenentBioscience, Wageningen Plant Research, Wageningen University and Research, Wageningen, Netherlands.
Ric C H de VosBioscience, Wageningen Plant Research, Wageningen University and Research, Wageningen, Netherlands.
Carmen Diez-SimonBioscience, Wageningen Plant Research, Wageningen University and Research, Wageningen, Netherlands.
Roland MummBioscience, Wageningen Plant Research, Wageningen University and Research, Wageningen, Netherlands.
Fiona R HayDepartment of Agroecology, Aarhus University, Slagelse, Denmark.
Sasiwimon SiricharoenBioscience, Wageningen Plant Research, Wageningen University and Research, Wageningen, Netherlands.
Devendra K YadavaDivision of Crop Science, Indian Council of Agricultural Research, New Delhi, India.
Steven P C GrootBioscience, Wageningen Plant Research, Wageningen University and Research, Wageningen, Netherlands.
Wageningen University & Research · NLAarhus University · DKIndian Council of Agricultural Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Seed aging during storage results in loss of vigor and germination ability due to the accumulation of damage by oxidation reactions. Experimental aging tests, for instance to study genetic variation, aim to mimic natural aging in a shorter timeframe. As the oxidation rate is increased by elevating the temperature, moisture, and oxygen levels, this study aimed to (1) investigate the effect of experimental rice seed aging by an elevated partial pressure of oxygen (EPPO), (2) elucidate the mechanism of dry-EPPO aging and (3) compare aging under dry-EPPO conditions to aging under traditional moist-controlled deterioration (CD) conditions and to long-term ambient storage. Dry seeds from 20 diverse rice accessions were experimentally aged under EPPO (200 times higher oxygen levels), at 50% relative humidity (RH), along with storage under high-pressure nitrogen gas and ambient conditions as controls. While no decline in germination was observed with ambient storage, there was significant aging of the rice seeds under EPPO storage, with considerable variation in the aging rate among the accessions, with an average decline toward 50% survival obtained after around 21 days in EPPO storage and total loss of germination after 56 days. Storage under high-pressure nitrogen gas resulted in a small but significant decline, by an average of 5% germination after 56 days. In a second experiment, seven rice seed lots were stored under EPPO as compared to a moist-CD test and two different long-term ambient storage conditions, i.e., conditioned warehouse seed storage (CWSS) and traditional rice seed storage (TRSS). Untargeted metabolomics (with identification of lipid and volatile compounds profiles) showed a relatively high increase in levels of oxidized lipids and related volatiles under all four storage conditions. These compounds had a high negative correlation with seed viability, indicating oxidation as a main deteriorating process during seed aging. Correlation analysis indicated that EPPO storage at 50% RH is more related to aging under TRSS at 60% and CD-aging at 75% ERH rather than CWSS at 40% ERH. In conclusion, aging rice seeds under EPPO conditions is a suitable experimental aging method for analyzing variation among seed lots or genotypes for longevity under storage.

Indexed as

EPPO storagelipid oxidationOryza sativa L. (rice)seed agingseed deteriorationseed longevity and viabilityseed quality and storagevolatiles

Identifiers

PMID36531402
PMCPMC9751813
OpenAlexW4310490607

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.