Evidence map›Paper›PMID 36531358›Full record

ArticleFrontiers in plant science2022

Improving bitter pit prediction by the use of X-ray fluorescence (XRF): A new approach by multivariate classification.

Claudia Moggia, Manuel A Bravo, Ricardo Baettig, Marcelo Valdés, Sebastián Romero-Bravo, Mauricio Zúñiga, Jorge Cornejo, Fabio Gosetti, Davide Ballabio, Ricardo A Cabeza and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 56% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 3 countries.

Claudia MoggiaPlant Breeding and Phenomics Center, Faculty of Agricultural Sciences, Universidad de Talca, Talca, Chile.
Manuel A BravoLaboratorio de Química Analítica y Ambiental, Instituto de Química, Pontificia Universidad Católica de Valparaíso, Valparaíso, Chile.
Ricardo BaettigFacultad de Ciencias Forestales y de la Conservación de la Naturaleza, Universidad de Chile, Santiago, Chile.
Marcelo ValdésPlant Breeding and Phenomics Center, Faculty of Agricultural Sciences, Universidad de Talca, Talca, Chile.
Sebastián Romero-BravoDepartment of Agricultural Sciences, Universidad Católica del Maule, Curicó, Chile.
Mauricio ZúñigaDepartment of Agricultural Sciences, Universidad Católica del Maule, Curicó, Chile.
Jorge CornejoPlant Breeding and Phenomics Center, Faculty of Agricultural Sciences, Universidad de Talca, Talca, Chile.
Fabio GosettiMilano Chemometrics and QSAR Research Group, Department of Earth and Environmental Sciences, University of Milano-Bicocca, Milano, Italy.
Davide BallabioMilano Chemometrics and QSAR Research Group, Department of Earth and Environmental Sciences, University of Milano-Bicocca, Milano, Italy.
Ricardo A CabezaPlant Nutrition Laboratory, Department of Crop Sciences, Faculty of Agricultural Sciences, University of Talca, Talca, Chile.
Randolph BeaudryDepartment of Horticulture, Michigan State University, East Lansing, MI, United States.
Gustavo A LobosPlant Breeding and Phenomics Center, Faculty of Agricultural Sciences, Universidad de Talca, Talca, Chile.
University of Talca · CLCatholic University of the Maule · CLUniversity of Milano-Bicocca · ITMichigan State University · USPontificia Universidad Católica de Valparaíso · CLUniversity of Chile · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bitter pit (BP) is one of the most relevant post-harvest disorders for apple industry worldwide, which is often related to calcium (Ca) deficiency at the calyx end of the fruit. Its occurrence takes place along with an imbalance with other minerals, such as potassium (K). Although the K/Ca ratio is considered a valuable indicator of BP, a high variability in the levels of these elements occurs within the fruit, between fruits of the same plant, and between plants and orchards. Prediction systems based on the content of elements in fruit have a high variability because they are determined in samples composed of various fruits. With X-ray fluorescence (XRF) spectrometry, it is possible to characterize non-destructively the signal intensity for several mineral elements at a given position in individual fruit and thus, the complete signal of the mineral composition can be used to perform a predictive model to determine the incidence of bitter pit. Therefore, it was hypothesized that using a multivariate modeling approach, other elements beyond the K and Ca could be found that could improve the current clutter prediction capability. Two studies were carried out: on the first one an experiment was conducted to determine the K/Ca and the whole spectrum using XRF of a balanced sample of affected and non-affected 'Granny Smith' apples. On the second study apples of three cultivars ('Granny Smith', 'Brookfield' and 'Fuji'), were harvested from two commercial orchards to evaluate the use of XRF to predict BP. With data from the first study a multivariate classification system was trained (balanced database of healthy and BP fruit, consisting in 176 from each group) and then the model was applied on the second study to fruit from two orchards with a history of BP. Results show that when dimensionality reduction was performed on the XRF spectra (1.5 - 8 KeV) of 'Granny Smith' apples, comparing fruit with and without BP, along with K and Ca, four other elements (i.e., Cl, Si, P, and S) were found to be deterministic. However, the PCA revealed that the classification between samples (BP vs. non-BP fruit) was not possible by univariate analysis (individual elements or the K/Ca ratio).Therefore, a multivariate classification approach was applied, and the classification measures (sensitivity, specificity, and balanced precision) of the PLS-DA models for all cultivars evaluated ('Granny Smith', 'Fuji' and 'Brookfield') on the full training samples and with both validation procedures (Venetian and Monte Carlo), ranged from 0.76 to 0.92. The results of this work indicate that using this technology at the individual fruit level is essential to understand the factors that determine this disorder and can improve BP prediction of intact fruit.

Indexed as

calyxK/CaMalus × domesticamodellingrefrigerated storage

Identifiers

PMID36531358
PMCPMC9748620
OpenAlexW4310370781

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.