Evidence map›Paper›PMID 36530377›Full record

ArticleStochastic environmental research and risk assessment : research journal2023

Spatio-temporal modeling of infectious diseases by integrating compartment and point process models.

André Victor Ribeiro Amaral, Jonatan A González, Paula Moraga

Open access · bronzeAbstract read
In one paragraph

Article in Stochastic environmental research and risk assessment : research journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

André Victor Ribeiro AmaralCEMSE Division, Statistics Program, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.ORCID 0000-0003-3748-6801
Jonatan A GonzálezCEMSE Division, Statistics Program, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
Paula MoragaCEMSE Division, Statistics Program, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
King Abdullah University of Science and Technology · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Infectious disease modeling plays an important role in understanding disease spreading dynamics and can be used for prevention and control. The well-known SIR (Susceptible, Infected, and Recovered) compartment model and spatial and spatio-temporal statistical models are common choices for studying problems of this kind. This paper proposes a spatio-temporal modeling framework to characterize infectious disease dynamics by integrating the SIR compartment and log-Gaussian Cox process (LGCP) models. The method's performance is assessed via simulation using a combination of real and synthetic data for a region in São Paulo, Brazil. We also apply our modeling approach to analyze COVID-19 dynamics in Cali, Colombia. The results show that our modified LGCP model, which takes advantage of information obtained from the previous SIR modeling step, leads to a better forecasting performance than equivalent models that do not do that. Finally, the proposed method also allows the incorporation of age-stratified contact information, which provides valuable decision-making insights. Supplementary Information: The online version contains supplementary material available at 10.1007/s00477-022-02354-4.

Indexed as

Compartment SIR modelInfectious diseasesLog-Gaussian Cox processSpatial point processSpatio-temporal modeling

Identifiers

PMID36530377
PMCPMC9746591
OpenAlexW4311343080

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.