Evidence map›Paper›PMID 36530164›Full record

ArticlePlant physiology2023

An unexpected role for tomato threonine deaminase 2 in host defense against bacterial infection.

In-Cheol Yeo, Ana Marcia Escocard de Azevedo Manhaes, Jun Liu, Julian Avila, Ping He, Timothy P Devarenne

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

In-Cheol YeoDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas 77843, USA.ORCID 0000-0001-8562-7213
Ana Marcia Escocard de Azevedo ManhaesDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas 77843, USA.ORCID 0000-0003-0203-6173
Jun LiuDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas 77843, USA.ORCID 0000-0002-9272-9602
Julian AvilaDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas 77843, USA.ORCID 0000-0001-9388-3946
Ping HeDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas 77843, USA.ORCID 0000-0002-5926-8349
Timothy P DevarenneDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas 77843, USA.ORCID 0000-0001-6032-8049
Texas A&M University · US

Funding

Differential regulation of plant innate immunityR01GM092893 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HE, PING · 2010 to 2022
$2.7M
Signaling activation and constraints in maintaining immune homeostasisR35GM149197 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Ping He · 2023 to 2026
$1.2M
NIGMS NIH HHS R01 GM092893NIGMS NIH HHS R35 GM149197
6 · The paper itself

Abstract

The hormones salicylic acid (SA) and jasmonic acid (JA) often act antagonistically in controlling plant defense pathways in response to hemibiotrophs/biotrophs (hemi/biotroph) and herbivores/necrotrophs, respectively. Threonine deaminase (TD) converts threonine to α-ketobutyrate and ammonia as the committed step in isoleucine (Ile) biosynthesis and contributes to JA responses by producing the Ile needed to make the bioactive JA-Ile conjugate. Tomato (Solanum lycopersicum) plants have two TD genes: TD1 and TD2. A defensive role for TD2 against herbivores has been characterized in relation to JA-Ile production. However, it remains unknown whether TD2 is also involved in host defense against bacterial hemi/biotrophic and necrotrophic pathogens. Here, we show that in response to the bacterial pathogen-associated molecular pattern (PAMP) flagellin flg22 peptide, an activator of SA-based defense responses, TD2 activity is compromised, possibly through carboxy-terminal cleavage. TD2 knockdown (KD) plants showed increased resistance to the hemibiotrophic bacterial pathogen Pseudomonas syringae but were more susceptible to the necrotrophic fungal pathogen Botrytis cinerea, suggesting TD2 plays opposite roles in response to hemibiotrophic and necrotrophic pathogens. This TD2 KD plant differential response to different pathogens is consistent with SA- and JA-regulated defense gene expression. flg22-treated TD2 KD plants showed high expression levels of SA-responsive genes, whereas TD2 KD plants treated with the fungal PAMP chitin showed low expression levels of JA-responsive genes. This study indicates TD2 acts negatively in defense against hemibiotrophs and positively against necrotrophs and provides insight into a new TD2 function in the elaborate crosstalk between SA and JA signaling induced by pathogen infection.

Indexed as

Bacterial InfectionsSolanum lycopersicumBotrytisCyclopentanesGene Expression Regulation, PlantIsoleucineOxylipinsPlant DiseasesSalicylic AcidThreonine DehydrataseCyclopentanesIsoleucinejasmonic acidjasmonoyl-isoleucineOxylipinsSalicylic AcidThreonine Dehydratase

Identifiers

PMID36530164
PMCPMC10152684
OpenAlexW4311930224

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.