Evidence map›Paper›PMID 36529906›Full record

ArticleG3 (Bethesda, Md.)2023

The rate of spontaneous mutations in yeast deficient for MutSβ function.

Yevgeniy Plavskin, Maria Stella de Biase, Roland F Schwarz, Mark L Siegal

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Yevgeniy PlavskinCenter for Genomics and Systems Biology, New York University, New York 10003, USA.ORCID 0000-0002-6911-3009
Maria Stella de BiaseBerlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin 10115, Germany.ORCID 0000-0003-0383-5161
Roland F SchwarzBerlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin 10115, Germany.ORCID 0000-0001-9155-4268
Mark L SiegalCenter for Genomics and Systems Biology, New York University, New York 10003, USA.ORCID 0000-0001-6930-2988
New York University · USMax Delbrück Center · DEUniversity of Cologne · DE

Funding

Genetic and Nongenetic Variation in Complex TraitsR35GM148344 · NIGMS · NEW YORK UNIVERSITY · PI Mark L Siegal · 2023 to 2026
$1.7M
Genetic and Nongenetic Variation in Complex TraitsR35GM118170 · NIGMS · NEW YORK UNIVERSITY · PI SIEGAL, MARK L · 2016 to 2021
$1.7M
NIGMS NIH HHS R35 GM118170NIGMS NIH HHS R35 GM148344
6 · The paper itself

Abstract

Mutations in simple sequence repeat loci underlie many inherited disorders in humans, and are increasingly recognized as important determinants of natural phenotypic variation. In eukaryotes, mutations in these sequences are primarily repaired by the MutSβ mismatch repair complex. To better understand the role of this complex in mismatch repair and the determinants of simple sequence repeat mutation predisposition, we performed mutation accumulation in yeast strains with abrogated MutSβ function. We demonstrate that mutations in simple sequence repeat loci in the absence of mismatch repair are primarily deletions. We also show that mutations accumulate at drastically different rates in short (<8 bp) and longer repeat loci. These data lend support to a model in which the mismatch repair complex is responsible for repair primarily in longer simple sequence repeats.

Indexed as

DNA Mismatch RepairSaccharomyces cerevisiaeDNA RepairHumansMicrosatellite RepeatsMutagenesisMutationinsertions/deletionsmismatch repairmutation accumulationmutation ratessimple sequence repeats

Identifiers

PMID36529906
PMCPMC9997558
OpenAlexW4311873253

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.