Evidence map›Paper›PMID 36529733›Full record

ArticleBMC plant biology2022

Transcriptome reveals insights into biosynthesis of ginseng polysaccharides.

Xiaoxue Fang, Huaying Wang, Xinteng Zhou, Jing Zhang, Hongxing Xiao

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Xiaoxue FangKey Laboratory of Molecular Epigenetics of Ministry of Education, Northeast Normal University, 130024, Changchun, China.
Huaying WangKey Laboratory of Molecular Epigenetics of Ministry of Education, Northeast Normal University, 130024, Changchun, China.
Xinteng ZhouKey Laboratory of Molecular Epigenetics of Ministry of Education, Northeast Normal University, 130024, Changchun, China.
Jing ZhangForestry Survey and Design Institute of Jilin Province, 130022, Changchun, China.
Hongxing XiaoKey Laboratory of Molecular Epigenetics of Ministry of Education, Northeast Normal University, 130024, Changchun, China. xiaohx771@nenu.edu.cn.
Northeast Normal University · CN

Funding

National Natural Science Foundation of China 31770243
6 · The paper itself

Abstract

backgroundGinseng polysaccharides, have been used to treat various diseases as an important active ingredient. Nevertheless, the biosynthesis of ginseng polysaccharides is poorly understood. To elucidate the biosynthesis mechanism of ginseng polysaccharides, combined the transcriptome analysis and polysaccharides content determination were performed on the roots, stems, and leaves collected from four cultivars of ginseng.

resultsThe results indicated that the total contents of nine monosaccharides were highest in the roots. Moreover, the total content of nine monosaccharides in the roots of the four cultivars were different but similar in stems and leaves. Glucose (Glc) was the most component of all monosaccharides. In total, 19 potential enzymes synthesizing of ginseng polysaccharides were identified, and 17 enzymes were significantly associated with polysaccharides content. Among these genes, the expression of phosphoglucomutase (PGM), glucose-6-phosphate isomerase (GPI), UTP-glucose-1-phosphate uridylyltransferase (UGP2), fructokinase (scrK), mannose-1-phosphate guanylyltransferase (GMPP), phosphomannomutase (PMM), UDP-glucose 4-epimerase (GALE), beta-fructofuranosidase (sacA), and sucrose synthase (SUS) were correlated with that of MYB, AP2/ERF, bZIP, and NAC transcription factors (TFs). These TFs may regulate the expression of genes involved in ginseng polysaccharides synthesis.

conclusionOur findings could provide insight into a better understanding of the regulatory mechanism of polysaccharides biosynthesis, and would drive progress in genetic improvement and plantation development of ginseng.

Indexed as

PanaxTranscriptomeGene Expression ProfilingMonosaccharidesPolysaccharidesMonosaccharidesPolysaccharidesDifferentially expressed genesGinsengPolysaccharidesTranscription factorsTranscriptomes

Identifiers

PMID36529733
PMCPMC9761977
OpenAlexW4312067481

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.