Evidence map›Paper›PMID 36528619›Full record

ArticleNPJ biofilms and microbiomes2022

Density and temperature controlled fluid extraction in a bacterial biofilm is determined by poly-γ-glutamic acid production.

Ryan J Morris, David Stevenson, Tetyana Sukhodub, Nicola R Stanley-Wall, Cait E MacPhee

Open access · goldAbstract read
In one paragraph

Article in NPJ biofilms and microbiomes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Ryan J MorrisNational Biofilms Innovation Centre, School of Physics and Astronomy, The University of Edinburgh, Edinburgh, EH9 3FD, UK. ryan.morris@ed.ac.uk.ORCID 0000-0003-4764-3639
David StevensonDivision of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, DD1 5EH, UK.
Tetyana SukhodubDivision of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, DD1 5EH, UK.
Nicola R Stanley-WallDivision of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, DD1 5EH, UK. n.r.stanley-wall@dundee.ac.uk.ORCID 0000-0002-5936-9721
Cait E MacPheeNational Biofilms Innovation Centre, School of Physics and Astronomy, The University of Edinburgh, Edinburgh, EH9 3FD, UK.ORCID 0000-0001-8313-8387
University of Dundee · GBUniversity of Edinburgh · GB

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

A hallmark of microbial biofilms is the self-production of an extracellular molecular matrix that encases the resident cells. The matrix provides protection from the environment, while spatial heterogeneity of gene expression influences the structural morphology and colony spreading dynamics. Bacillus subtilis is a model bacterial system used to uncover the regulatory pathways and key building blocks required for biofilm growth and development. In this work, we report on the emergence of a highly active population of bacteria during the early stages of biofilm formation, facilitated by the extraction of fluid from the underlying agar substrate. We trace the origin of this fluid extraction to the production of poly-γ-glutamic acid (PGA). The flagella-dependent activity develops behind a moving front of fluid that propagates from the boundary of the biofilm towards the interior. The extent of fluid proliferation is controlled by the presence of extracellular polysaccharides (EPS). We also find that PGA production is positively correlated with higher temperatures, resulting in high-temperature mature biofilm morphologies that are distinct from the rugose colony biofilm architecture typically associated with B. subtilis. Although previous reports have suggested that PGA production does not play a major role in biofilm morphology in the undomesticated isolate NCIB 3610, our results suggest that this strain produces distinct biofilm matrices in response to environmental conditions.

Indexed as

Glutamic AcidBacillus subtilisBiofilmsTemperatureGlutamic Acid

Identifiers

PMID36528619
PMCPMC9759580
OpenAlexW4313324618

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.