Evidence map›Paper›PMID 36527454›Full record

ArticleBioprocess and biosystems engineering2023

Affinity-based and in a single step purification of recombinant horseradish peroxidase A2A isoenzyme produced by Pichia pastoris.

Melek Acar, Nurgul Abul, Seyda Yildiz, Ezgi Dag Taskesenligil, Serpil Gerni, Yagmur Unver, Ramazan Kalin, Hasan Ozdemir

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Article in Bioprocess and biosystems engineering, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Melek AcarDepartment of Molecular Biology and Genetics, Faculty of Science, Atatürk University, Erzurum, Turkey.ORCID http://orcid.org/0000-0001-5931-7799
Nurgul AbulDepartment of Chemistry, Faculty of Science, Atatürk University, Erzurum, Turkey.ORCID http://orcid.org/0000-0002-2715-0151
Seyda YildizDepartment of Molecular Biology and Genetics, Faculty of Science, Atatürk University, Erzurum, Turkey.ORCID http://orcid.org/0000-0003-0957-7343
Ezgi Dag TaskesenligilDepartment of Molecular Biology and Genetics, Faculty of Science, Atatürk University, Erzurum, Turkey.ORCID http://orcid.org/0000-0002-5184-8031
Serpil GerniDepartment of Chemistry, Faculty of Science, Atatürk University, Erzurum, Turkey.ORCID http://orcid.org/0000-0001-7699-1697
Yagmur UnverDepartment of Molecular Biology and Genetics, Faculty of Science, Atatürk University, Erzurum, Turkey. yagmurunver@yahoo.com.ORCID http://orcid.org/0000-0003-1497-081X
Ramazan KalinDepartment of Basic Sciences, Faculty of Science, Erzurum Technical University, Erzurum, Turkey.ORCID http://orcid.org/0000-0002-5917-1299
Hasan OzdemirDepartment of Chemistry, Faculty of Science, Atatürk University, Erzurum, Turkey. hozdemir@atauni.edu.tr.ORCID http://orcid.org/0000-0002-4059-0442
Atatürk University · TRErzurum Technical University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Horseradish peroxidase (HRP) is an oxidoreductase enzyme and oxidizes various inorganic and organic compounds. It has wide application areas such as immunological tests, probe-based test techniques, removal of phenolic pollutants from wastewater and organic synthesis. HRP is found in the root of the horseradish plant as a mixture of different isoenzymes, and it is very difficult to separate these enzymes from each other. In this regard, recombinant production is a very advantageous method in terms of producing the desired isoenzyme. This study was performed to produce HRP A2A isoenzyme extracellularly in Pichia pastoris and to purify this enzyme in a single step using a 3-amino-4-chloro benzohydrazide affinity column. First, codon-optimized HRP A2A gene was amplified and inserted into pPICZαC. So, obtained pPICZαC-HRPA2A was cloned in E. coli cells. Then, P. pastoris X-33 cells were transformed with linearized recombinant DNA and a yeast clone was cultivated for extracellular recombinant HRP A2A (rHRP A2A) enzyme production. Then, the purification of this enzyme was performed in a single step by affinity chromatography. The molecular mass of purified rHRP A2A enzyme was found to be about 40 kDa. According to characterization studies of the purified enzyme, the optimum pH and ionic strength for the rHRP A2A isoenzyme were determined to be 6.0 and 0.04 M, respectively, and o-dianisidine had the highest specificity with the lowest Km and Vmax values. Thus, this is an economical procedure to purify HRP A2A isoenzyme without time-consuming and laborious isolation from an isoenzyme mixture.

Indexed as

Escherichia coliIsoenzymesHorseradish PeroxidasePichiaRecombinant ProteinsSaccharomycetalesHorseradish PeroxidaseIsoenzymesRecombinant ProteinsAffinity columnExtracellular expressionHRP A2A isoenzymePichia pastorisPurification

Identifiers

PMID36527454
OpenAlexW4311822906

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.