Evidence map›Paper›PMID 36526439›Full record

ArticleDatabase : the journal of biological databases and curation2022

CafeteriaSA corpus: scientific abstracts annotated across different food semantic resources.

Gjorgjina Cenikj, Eva Valenčič, Gordana Ispirova, Matevž Ogrinc, Riste Stojanov, Peter Korošec, Ermanno Cavalli, Barbara Koroušić Seljak, Tome Eftimov

Abstract read
In one paragraph

Article in Database : the journal of biological databases and curation, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Gjorgjina CenikjDepartment of Computer Systems, Jožef Stefan Institute, Jamova cesta 39, Ljubljana 1000, Slovenia.ORCID 0000-0002-2723-0821
Eva ValenčičDepartment of Computer Systems, Jožef Stefan Institute, Jamova cesta 39, Ljubljana 1000, Slovenia.
Gordana IspirovaDepartment of Computer Systems, Jožef Stefan Institute, Jamova cesta 39, Ljubljana 1000, Slovenia.
Matevž OgrincDepartment of Computer Systems, Jožef Stefan Institute, Jamova cesta 39, Ljubljana 1000, Slovenia.
Riste StojanovFaculty of Computer Science and Engineering, Ss. Cyril and Methodius University in Skopje, Ruger Boshkovikj 16, Skopje 1000, North Macedonia.
Peter KorošecDepartment of Computer Systems, Jožef Stefan Institute, Jamova cesta 39, Ljubljana 1000, Slovenia.
Ermanno CavalliEuropean Food Safety Authority, Via Carlo Magno 1A, Parma 43126, Italy.
Barbara Koroušić SeljakDepartment of Computer Systems, Jožef Stefan Institute, Jamova cesta 39, Ljubljana 1000, Slovenia.
Tome EftimovDepartment of Computer Systems, Jožef Stefan Institute, Jamova cesta 39, Ljubljana 1000, Slovenia.ORCID 0000-0001-7330-1902

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the last decades, a great amount of work has been done in predictive modeling of issues related to human and environmental health. Resolution of issues related to healthcare is made possible by the existence of several biomedical vocabularies and standards, which play a crucial role in understanding the health information, together with a large amount of health-related data. However, despite a large number of available resources and work done in the health and environmental domains, there is a lack of semantic resources that can be utilized in the food and nutrition domain, as well as their interconnections. For this purpose, in a European Food Safety Authority-funded project CAFETERIA, we have developed the first annotated corpus of 500 scientific abstracts that consists of 6407 annotated food entities with regard to Hansard taxonomy, 4299 for FoodOn and 3623 for SNOMED-CT. The CafeteriaSA corpus will enable the further development of natural language processing methods for food information extraction from textual data that will allow extracting food information from scientific textual data. Database URL: https://zenodo.org/record/6683798#.Y49wIezMJJF.

Indexed as

Natural Language ProcessingSemanticsDatabases, FactualHumansInformation Storage and Retrieval

Identifiers

PMID36526439
PMCPMC9757992

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.