Evidence map›Paper›PMID 36523841›Full record

ArticleFrontiers in microbiology2022

Nutrient niche specificity for glycosaminoglycans is reflected in polysaccharide utilization locus architecture of gut

Annelieke Overbeeke, Bela Hausmann, Georgi Nikolov, Fatima C Pereira, Craig W Herbold, David Berry

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 8 citations in OpenAlex.

  1. Testosterone administration partially modulates gut microbiota responses to severe energy deficit.American journal of physiology. Endocrinology and metabolism · 2026
    Trial
  2. Comparative Genomic and Functional Profiling of ECM-Targeting Enzymes inbioRxiv : the preprint server for biology · 2026
    Article
  3. Chondroitin sulfate degradation bolstersbioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. The gut microbiota and its biogeography.Nature reviews. Microbiology · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Annelieke OverbeekeCentre for Microbiology and Environmental Systems Science, University of Vienna, Vienna, Austria.
Bela HausmannJoint Microbiome Facility, Medical University of Vienna, Vienna, Austria.
Georgi NikolovCentre for Microbiology and Environmental Systems Science, University of Vienna, Vienna, Austria.
Fatima C PereiraCentre for Microbiology and Environmental Systems Science, University of Vienna, Vienna, Austria.
Craig W HerboldCentre for Microbiology and Environmental Systems Science, University of Vienna, Vienna, Austria.
David BerryCentre for Microbiology and Environmental Systems Science, University of Vienna, Vienna, Austria.
University of Vienna · ATMedical University of Vienna · AT

Funding

Austrian Science Fund FWF P 27831
6 · The paper itself

Abstract

Introduction: Glycosaminoglycans (GAGs) present in the mucosal layer can be used as nutrients by certain intestinal bacteria, particularly members of the Bacteroides. GAG abundances are altered in some diseases such as inflammatory bowel diseases, which may affect microbial composition and activity, and it is therefore important to understand GAG utilization by members of the gut microbiota. Methods: We used growth assays, transcriptomics, and comparative genomics to evaluate chondroitin sulfate (CS) and hyaluronan (HA) degradation ability by multiple gut Bacteroides species. Results and discussion: We found that not all Bacteroides species able to degrade CS could also degrade HA, despite having lyases which act on both compounds. We propose that in the model organism Bacteroides thetaiotaomicron, the lyase BT_3328 in combination with surface binding proteins BT_3329 and BT_3330 and potentially BT_4411 are involved in HA breakdown. Furthermore, degradation of both compounds provides public goods for other Bacteroides, including non-degraders, suggesting that cooperative degradation as well as cross-feeding may be widespread in the mucosal glycan utilization clade.

Indexed as

bacteroideschondroitin sulfateglycosaminoglycanshyaluronanintestine

Identifiers

PMID36523841
PMCPMC9745678
OpenAlexW4310988126

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.