Evidence map›Paper›PMID 36523771›Full record

ArticleFrontiers in genetics2022

Development and performance evaluation of an artificial intelligence algorithm using cell-free DNA fragment distance for non-invasive prenatal testing (aiD-NIPT).

Junnam Lee, Sae-Mi Lee, Jin Mo Ahn, Tae-Rim Lee, Wan Kim, Eun-Hae Cho, Chang-Seok Ki

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Article in Frontiers in genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Junnam LeeGenome Research Center, GC Genome, Yongin, South Korea.
Sae-Mi LeeGenome Research Center, GC Genome, Yongin, South Korea.
Jin Mo AhnGenome Research Center, GC Genome, Yongin, South Korea.
Tae-Rim LeeGenome Research Center, GC Genome, Yongin, South Korea.
Wan KimGenome Research Center, GC Genome, Yongin, South Korea.
Eun-Hae ChoGenome Research Center, GC Genome, Yongin, South Korea.
Chang-Seok KiGenome Research Center, GC Genome, Yongin, South Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

With advances in next-generation sequencing technology, non-invasive prenatal testing (NIPT) has been widely implemented to detect fetal aneuploidies, including trisomy 21, 18, and 13 (T21, T18, and T13). Most NIPT methods use cell-free DNA (cfDNA) fragment count (FC) in maternal blood. In this study, we developed a novel NIPT method using cfDNA fragment distance (FD) and convolutional neural network-based artificial intelligence algorithm (aiD-NIPT). Four types of aiD-NIPT algorithm (mean, median, interquartile range, and its ensemble) were developed using 2,215 samples. In an analysis of 17,678 clinical samples, all algorithms showed >99.40% accuracy for T21/T18/T13, and the ensemble algorithm showed the best performance (sensitivity: 99.07%, positive predictive value (PPV): 88.43%); the FC-based conventional Z-score and normalized chromosomal value showed 98.15% sensitivity, with 40.77% and 36.81% PPV, respectively. In conclusion, FD-based aiD-NIPT was successfully developed, and it showed better performance than FC-based NIPT methods.

Indexed as

artificial intelligence algorithm (AI)cfDNA fragment distanceconvolutional neural network (CNN)fetal chromosomal aneuploidynon-invasive prenatal testing (NIPT)

Identifiers

PMID36523771
PMCPMC9745024

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.