Evidence map›Paper›PMID 36523641›Full record

ArticleRadiology. Artificial intelligence2022

A Deep Learning Segmentation Pipeline for Cardiac T1 Mapping Using MRI Relaxation-based Synthetic Contrast Augmentation.

Nitish Bhatt, Venkat Ramanan, Ady Orbach, Labonny Biswas, Matthew Ng, Fumin Guo, Xiuling Qi, Lancia Guo, Laura Jimenez-Juan, Idan Roifman and 2 more

Open access · greenAbstract read
In one paragraph

Article in Radiology. Artificial intelligence, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Guideline
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Nitish BhattFaculty of Medicine (N.B.), Department of Medical Imaging (L.G., L.J.J.), Department of Medicine (I.R.), and Department of Medical Biophysics (G.A.W., N.R.G.), University of Toronto, 1 King's College Circle, Toronto, ON, Canada M5S A18; Physical Sciences Platform, Sunnybrook Research Institute, Toronto, Ontario, Canada (N.B., V.R., L.B., M.N., F.G., X.Q., G.A.W., N.R.G.); Schulich Heart Program (V.R., A.O., L.B., M.N., F.G., X.Q., I.R., G.A.W., N.R.G.) and Department of Radiology (L.G., L.J.J.), Sunnybrook Health Sciences Centre, Toronto, Ontario, Canada; and Department of Radiology, St Michael's Hospital, Toronto, Ontario, Canada (L.J.J.).ORCID 0000-0002-3630-3447
Venkat RamananFaculty of Medicine (N.B.), Department of Medical Imaging (L.G., L.J.J.), Department of Medicine (I.R.), and Department of Medical Biophysics (G.A.W., N.R.G.), University of Toronto, 1 King's College Circle, Toronto, ON, Canada M5S A18; Physical Sciences Platform, Sunnybrook Research Institute, Toronto, Ontario, Canada (N.B., V.R., L.B., M.N., F.G., X.Q., G.A.W., N.R.G.); Schulich Heart Program (V.R., A.O., L.B., M.N., F.G., X.Q., I.R., G.A.W., N.R.G.) and Department of Radiology (L.G., L.J.J.), Sunnybrook Health Sciences Centre, Toronto, Ontario, Canada; and Department of Radiology, St Michael's Hospital, Toronto, Ontario, Canada (L.J.J.).
Ady OrbachFaculty of Medicine (N.B.), Department of Medical Imaging (L.G., L.J.J.), Department of Medicine (I.R.), and Department of Medical Biophysics (G.A.W., N.R.G.), University of Toronto, 1 King's College Circle, Toronto, ON, Canada M5S A18; Physical Sciences Platform, Sunnybrook Research Institute, Toronto, Ontario, Canada (N.B., V.R., L.B., M.N., F.G., X.Q., G.A.W., N.R.G.); Schulich Heart Program (V.R., A.O., L.B., M.N., F.G., X.Q., I.R., G.A.W., N.R.G.) and Department of Radiology (L.G., L.J.J.), Sunnybrook Health Sciences Centre, Toronto, Ontario, Canada; and Department of Radiology, St Michael's Hospital, Toronto, Ontario, Canada (L.J.J.).ORCID 0000-0003-0687-1045
Labonny BiswasFaculty of Medicine (N.B.), Department of Medical Imaging (L.G., L.J.J.), Department of Medicine (I.R.), and Department of Medical Biophysics (G.A.W., N.R.G.), University of Toronto, 1 King's College Circle, Toronto, ON, Canada M5S A18; Physical Sciences Platform, Sunnybrook Research Institute, Toronto, Ontario, Canada (N.B., V.R., L.B., M.N., F.G., X.Q., G.A.W., N.R.G.); Schulich Heart Program (V.R., A.O., L.B., M.N., F.G., X.Q., I.R., G.A.W., N.R.G.) and Department of Radiology (L.G., L.J.J.), Sunnybrook Health Sciences Centre, Toronto, Ontario, Canada; and Department of Radiology, St Michael's Hospital, Toronto, Ontario, Canada (L.J.J.).ORCID 0000-0002-4572-4630
Matthew NgFaculty of Medicine (N.B.), Department of Medical Imaging (L.G., L.J.J.), Department of Medicine (I.R.), and Department of Medical Biophysics (G.A.W., N.R.G.), University of Toronto, 1 King's College Circle, Toronto, ON, Canada M5S A18; Physical Sciences Platform, Sunnybrook Research Institute, Toronto, Ontario, Canada (N.B., V.R., L.B., M.N., F.G., X.Q., G.A.W., N.R.G.); Schulich Heart Program (V.R., A.O., L.B., M.N., F.G., X.Q., I.R., G.A.W., N.R.G.) and Department of Radiology (L.G., L.J.J.), Sunnybrook Health Sciences Centre, Toronto, Ontario, Canada; and Department of Radiology, St Michael's Hospital, Toronto, Ontario, Canada (L.J.J.).ORCID 0000-0001-8267-6167
Fumin GuoFaculty of Medicine (N.B.), Department of Medical Imaging (L.G., L.J.J.), Department of Medicine (I.R.), and Department of Medical Biophysics (G.A.W., N.R.G.), University of Toronto, 1 King's College Circle, Toronto, ON, Canada M5S A18; Physical Sciences Platform, Sunnybrook Research Institute, Toronto, Ontario, Canada (N.B., V.R., L.B., M.N., F.G., X.Q., G.A.W., N.R.G.); Schulich Heart Program (V.R., A.O., L.B., M.N., F.G., X.Q., I.R., G.A.W., N.R.G.) and Department of Radiology (L.G., L.J.J.), Sunnybrook Health Sciences Centre, Toronto, Ontario, Canada; and Department of Radiology, St Michael's Hospital, Toronto, Ontario, Canada (L.J.J.).ORCID 0000-0001-6220-1455
Xiuling QiFaculty of Medicine (N.B.), Department of Medical Imaging (L.G., L.J.J.), Department of Medicine (I.R.), and Department of Medical Biophysics (G.A.W., N.R.G.), University of Toronto, 1 King's College Circle, Toronto, ON, Canada M5S A18; Physical Sciences Platform, Sunnybrook Research Institute, Toronto, Ontario, Canada (N.B., V.R., L.B., M.N., F.G., X.Q., G.A.W., N.R.G.); Schulich Heart Program (V.R., A.O., L.B., M.N., F.G., X.Q., I.R., G.A.W., N.R.G.) and Department of Radiology (L.G., L.J.J.), Sunnybrook Health Sciences Centre, Toronto, Ontario, Canada; and Department of Radiology, St Michael's Hospital, Toronto, Ontario, Canada (L.J.J.).
Lancia GuoFaculty of Medicine (N.B.), Department of Medical Imaging (L.G., L.J.J.), Department of Medicine (I.R.), and Department of Medical Biophysics (G.A.W., N.R.G.), University of Toronto, 1 King's College Circle, Toronto, ON, Canada M5S A18; Physical Sciences Platform, Sunnybrook Research Institute, Toronto, Ontario, Canada (N.B., V.R., L.B., M.N., F.G., X.Q., G.A.W., N.R.G.); Schulich Heart Program (V.R., A.O., L.B., M.N., F.G., X.Q., I.R., G.A.W., N.R.G.) and Department of Radiology (L.G., L.J.J.), Sunnybrook Health Sciences Centre, Toronto, Ontario, Canada; and Department of Radiology, St Michael's Hospital, Toronto, Ontario, Canada (L.J.J.).ORCID 0000-0002-0445-4160
Laura Jimenez-JuanFaculty of Medicine (N.B.), Department of Medical Imaging (L.G., L.J.J.), Department of Medicine (I.R.), and Department of Medical Biophysics (G.A.W., N.R.G.), University of Toronto, 1 King's College Circle, Toronto, ON, Canada M5S A18; Physical Sciences Platform, Sunnybrook Research Institute, Toronto, Ontario, Canada (N.B., V.R., L.B., M.N., F.G., X.Q., G.A.W., N.R.G.); Schulich Heart Program (V.R., A.O., L.B., M.N., F.G., X.Q., I.R., G.A.W., N.R.G.) and Department of Radiology (L.G., L.J.J.), Sunnybrook Health Sciences Centre, Toronto, Ontario, Canada; and Department of Radiology, St Michael's Hospital, Toronto, Ontario, Canada (L.J.J.).ORCID 0000-0003-0560-7445
Idan RoifmanFaculty of Medicine (N.B.), Department of Medical Imaging (L.G., L.J.J.), Department of Medicine (I.R.), and Department of Medical Biophysics (G.A.W., N.R.G.), University of Toronto, 1 King's College Circle, Toronto, ON, Canada M5S A18; Physical Sciences Platform, Sunnybrook Research Institute, Toronto, Ontario, Canada (N.B., V.R., L.B., M.N., F.G., X.Q., G.A.W., N.R.G.); Schulich Heart Program (V.R., A.O., L.B., M.N., F.G., X.Q., I.R., G.A.W., N.R.G.) and Department of Radiology (L.G., L.J.J.), Sunnybrook Health Sciences Centre, Toronto, Ontario, Canada; and Department of Radiology, St Michael's Hospital, Toronto, Ontario, Canada (L.J.J.).ORCID 0000-0002-4058-4085
Graham A WrightFaculty of Medicine (N.B.), Department of Medical Imaging (L.G., L.J.J.), Department of Medicine (I.R.), and Department of Medical Biophysics (G.A.W., N.R.G.), University of Toronto, 1 King's College Circle, Toronto, ON, Canada M5S A18; Physical Sciences Platform, Sunnybrook Research Institute, Toronto, Ontario, Canada (N.B., V.R., L.B., M.N., F.G., X.Q., G.A.W., N.R.G.); Schulich Heart Program (V.R., A.O., L.B., M.N., F.G., X.Q., I.R., G.A.W., N.R.G.) and Department of Radiology (L.G., L.J.J.), Sunnybrook Health Sciences Centre, Toronto, Ontario, Canada; and Department of Radiology, St Michael's Hospital, Toronto, Ontario, Canada (L.J.J.).
Nilesh R GhugreFaculty of Medicine (N.B.), Department of Medical Imaging (L.G., L.J.J.), Department of Medicine (I.R.), and Department of Medical Biophysics (G.A.W., N.R.G.), University of Toronto, 1 King's College Circle, Toronto, ON, Canada M5S A18; Physical Sciences Platform, Sunnybrook Research Institute, Toronto, Ontario, Canada (N.B., V.R., L.B., M.N., F.G., X.Q., G.A.W., N.R.G.); Schulich Heart Program (V.R., A.O., L.B., M.N., F.G., X.Q., I.R., G.A.W., N.R.G.) and Department of Radiology (L.G., L.J.J.), Sunnybrook Health Sciences Centre, Toronto, Ontario, Canada; and Department of Radiology, St Michael's Hospital, Toronto, Ontario, Canada (L.J.J.).ORCID 0000-0002-5395-1956
Sunnybrook Health Science Centre · CASt. Michael's Hospital · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: To design and evaluate an automated deep learning method for segmentation and analysis of cardiac MRI T1 maps with use of synthetic T1-weighted images for MRI relaxation-based contrast augmentation. Materials and Methods: This retrospective study included MRI scans acquired between 2016 and 2019 from 100 patients (mean age ± SD, 55 years ± 13; 72 men) across various clinical abnormalities with use of a modified Look-Locker inversion recovery, or MOLLI, sequence to quantify native T1 (T1 Results: Internal testing showed high myocardial DSC relative to experts (0.81 ± 0.08), which was similar to interobserver DSC (0.81 ± 0.08). Automated segmental measurements strongly correlated with experts (T1 Conclusion: This deep learning method leveraging synthetic contrast augmentation may provide accurate automated T1 and ECV analysis for cardiac MRI data acquired across different abnormalities, centers, scanners, and T1 sequences.

Indexed as

CardiacConvolutional Neural NetworkDeep Learning AlgorithmsMachine Learning AlgorithmsMRISegmentationSupervised LearningTissue Characterization

Identifiers

PMID36523641
PMCPMC9745444
OpenAlexW4307923846

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.