Evidence map›Paper›PMID 36523607›Full record

ArticlePlant direct2022

Regulatory dynamics distinguishing desiccation tolerance strategies within resurrection grasses.

Brian St Aubin, Ching Man Wai, Sunil K Kenchanmane Raju, Chad E Niederhuth, Robert VanBuren

Open access · goldAbstract read
In one paragraph

Article in Plant direct, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Brian St AubinDepartment of Horticulture Michigan State University East Lansing MI USA.ORCID https://orcid.org/0000-0002-6656-1826
Ching Man WaiDepartment of Horticulture Michigan State University East Lansing MI USA.ORCID https://orcid.org/0000-0002-2913-5721
Sunil K Kenchanmane RajuDepartment of Plant Biology Michigan State University East Lansing MI USA.ORCID https://orcid.org/0000-0001-8960-094X
Chad E NiederhuthDepartment of Plant Biology Michigan State University East Lansing MI USA.
Robert VanBurenDepartment of Horticulture Michigan State University East Lansing MI USA.ORCID https://orcid.org/0000-0003-2133-2760
Michigan State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Desiccation tolerance has evolved recurrently in grasses using two unique strategies of either protecting or dismantling the photosynthetic apparatus to minimize photooxidative damage under life without water (anhydrobiosis). Here, we surveyed chromatin architecture and gene expression during desiccation in two closely related grasses with distinguishing desiccation tolerance strategies to identify regulatory dynamics underlying these unique adaptations. In both grasses, we observed a strong association between nearby chromatin accessibility and gene expression in desiccated tissues compared to well-watered, reflecting an unusual chromatin stability under anhydrobiosis. Integration of chromatin accessibility (ATACseq) and expression data (RNAseq) revealed a core desiccation response across these two grasses. This includes many genes with binding sites for the core seed development transcription factor ABI5, supporting the long-standing hypothesis that vegetative desiccation tolerance evolved from rewiring seed pathways.

Identifiers

PMID36523607
PMCPMC9748243
OpenAlexW4311497431

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.