Evidence map›Paper›PMID 36518946›Full record

ArticleApplications in plant sciences

Novel method for the quantification of rosette area from images of

Anna Knapp, Jordan Stefani, Ella Katz, Arnold J Bloom

Open access · goldAbstract read
In one paragraph

Article in Applications in plant sciences. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Anna KnappDepartment of Plant Sciences University of California Davis, One Shields Ave. Davis California 95616 USA.ORCID https://orcid.org/0000-0001-7707-9528
Jordan StefaniDepartment of Plant Sciences University of California Davis, One Shields Ave. Davis California 95616 USA.ORCID https://orcid.org/0000-0002-2130-536X
Ella KatzDepartment of Plant Sciences University of California Davis, One Shields Ave. Davis California 95616 USA.ORCID 0000-0003-1619-5597
Arnold J BloomDepartment of Plant Sciences University of California Davis, One Shields Ave. Davis California 95616 USA.ORCID 0000-0001-6006-1495
University of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Premise: The agar-based culture of Methods: We developed an image processing workflow in Python that estimates rosette area of Results: The rosette area measured from plate images was strongly correlated with the rosette area measured from directly overhead and moderately correlated with seedling mass. Rosette area in the large image set was significantly influenced by genotype and nitrogen treatment. The broad-sense heritability of leaf area measured using this method was 0.28. Discussion: These results indicated that this approach for estimating rosette area produces accurate shoot phenotype data. It can be used with image sets for which other methods of leaf area quantification prove unsuitable.

Indexed as

automated measurementdiversity panelhigh‐throughput phenotypingimage analysisleaf areaPython

Identifiers

PMID36518946
PMCPMC9742823
OpenAlexW4311426786

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.