Evidence map›Paper›PMID 36518527›Full record

ArticleNAR cancer2022

A convergent malignant phenotype in B-cell acute lymphoblastic leukemia involving the splicing factor SRRM1.

Adria Closa, Marina Reixachs-Solé, Antonio C Fuentes-Fayos, Katharina E Hayer, Juan L Melero, Fabienne R S Adriaanse, Romy S Bos, Manuel Torres-Diz, Stephen P Hunger, Kathryn G Roberts and 6 more

Open access · goldAbstract read
In one paragraph

Article in NAR cancer, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 4 countries.

Adria ClosaThe Shine-Dalgarno Centre for RNA Innovation, John Curtin School of Medical Research, Australian National University, Canberra, Australia.ORCID https://orcid.org/0000-0002-9302-337X
Marina Reixachs-SoléThe Shine-Dalgarno Centre for RNA Innovation, John Curtin School of Medical Research, Australian National University, Canberra, Australia.ORCID https://orcid.org/0000-0001-9446-8082
Antonio C Fuentes-FayosMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.
Katharina E HayerDivision of Cancer Pathobiology, Children's Hospital of Philadelphia, Philadelphia, USA.ORCID https://orcid.org/0000-0002-1463-3111
Juan L MeleroThe Shine-Dalgarno Centre for RNA Innovation, John Curtin School of Medical Research, Australian National University, Canberra, Australia.
Fabienne R S AdriaansePrincess Máxima Center for Pediatric Oncology, Utrecht, The Netherlands.
Romy S BosPrincess Máxima Center for Pediatric Oncology, Utrecht, The Netherlands.
Manuel Torres-DizDivision of Cancer Pathobiology, Children's Hospital of Philadelphia, Philadelphia, USA.
Stephen P HungerDivision of Oncology, Children's Hospital of Philadelphia, Philadelphia, USA.
Kathryn G RobertsDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, USA.
Charles G MullighanDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, USA.ORCID https://orcid.org/0000-0002-1871-1850
Ronald W StamPrincess Máxima Center for Pediatric Oncology, Utrecht, The Netherlands.
Andrei Thomas-TikhonenkoDivision of Cancer Pathobiology, Children's Hospital of Philadelphia, Philadelphia, USA.ORCID https://orcid.org/0000-0002-2739-2206
Justo P CastañoMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.ORCID https://orcid.org/0000-0002-3145-7287
Raúl M LuqueMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.
Eduardo EyrasThe Shine-Dalgarno Centre for RNA Innovation, John Curtin School of Medical Research, Australian National University, Canberra, Australia.ORCID https://orcid.org/0000-0003-0793-6218
Australian National University · AUChildren's Hospital of Philadelphia · USPrincess Máxima Center · NLSpanish Biomedical Research Centre in Physiopathology of Obesity and Nutrition · ESSt. Jude Children's Research Hospital · USInstituto Maimónides de Investigación Biomédica de Córdoba · ES

Funding

Cassette exons in neoplastic pro-B-cells: implications for immunotherapyU01CA232563 · NCI · CHILDREN'S HOSP OF PHILADELPHIA · PI BARASH, YOSEPH, THOMAS-TIKHONENKO, ANDREI · 2018 to 2022
$3.5M
NCI NIH HHS U01 CA232563
6 · The paper itself

Abstract

A significant proportion of infant B-cell acute lymphoblastic leukemia (B-ALL) patients remains with a dismal prognosis due to yet undetermined mechanisms. We performed a comprehensive multicohort analysis of gene expression, gene fusions, and RNA splicing alterations to uncover molecular signatures potentially linked to the observed poor outcome. We identified 87 fusions with significant allele frequency across patients and shared functional impacts, suggesting common mechanisms across fusions. We further identified a gene expression signature that predicts high risk independently of the gene fusion background and includes the upregulation of the splicing factor

Identifiers

PMID36518527
PMCPMC9732526
OpenAlexW4311824609

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.